| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0078 |
|---|
| Symbol | |
|---|
| ID | 3365553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 84310 |
|---|
| End bp | 85194 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637650421 |
|---|
| Product | Beta-lactamase-like |
|---|
| Protein accession | YP_233190 |
|---|
| Protein GI | 66043349 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCG GTGAAAAGCT TCATGTCGAA GCGCTCTTCG ACACGCATAC CTGGACCATC
AGCTATCTGG TGATGGACCT GCACAGCAAG CAATGTGCGC TGATCGACAG CGTGCTCGAT
TACGACCCCA AGTCCGGCCG CACCAGAACC GAGTCGGCCG ACCGGATGAT CGAACGGGCG
CAGGCCCTGG GCGCCTCGGT GCAGTGGATT TTCGAAACCC ATGTGCACGC CGATCACCTC
TCGGCAGCGC CGTATCTGAA ACAGCGGCTC GGTGGGCAAA TTGTCATCGG CAGCCATATC
ACTGCGGTGC AGGAAACCTT CGGCACGCTG TTCAACGCGC CGCCTGACTT TGCCCGCAAT
GGCAGTCAGT TCGATGTGCT GCTGGAAGAC AACGCCTCGT TCGCCCTCGG CGCGCTTGAG
GTCAAGGCCA TGCACACGCC CGGGCACACG CCGGCGTGCA TGAGTTACCT GGTGCAAGTC
GGTGACGCCA CGGTCGCGTT TGTCGGCGAT ACGCTGTTCA TGCCCGATTA CGGCACCGCT
CGGTGCGACT TCCCGGGTGC CGATGCGCGC ACGCTGTATC GCTCGATCAA GAAGCTGCTG
GCGCTGCCGC CGGAAACCCT GCTGTTCATG TGCCACGACT ACCTGCCCAA TGGCCGTGAG
CTGAAATACA TGACCACGGT TGCCGAACAG CGTGCCAGCA ATATCCATGT GCACGACGGG
GTGGATGAAG ACGCGTTCGT CGGCATGCGC GAAGCCCGTG ACGCGACGCT GGACATGCCG
GTGCTGATGC TGCCTGCGGT GCAGGTCAAC ATGCGCTGCG GCCACTTTCC CGAGCCGGAA
GACAACGGCG TCGTCTACCT GAAGATCCCG CTCAATGCCC TTTGA
|
|---|
| Protein sequence | MIIGEKLHVE ALFDTHTWTI SYLVMDLHSK QCALIDSVLD YDPKSGRTRT ESADRMIERA
QALGASVQWI FETHVHADHL SAAPYLKQRL GGQIVIGSHI TAVQETFGTL FNAPPDFARN
GSQFDVLLED NASFALGALE VKAMHTPGHT PACMSYLVQV GDATVAFVGD TLFMPDYGTA
RCDFPGADAR TLYRSIKKLL ALPPETLLFM CHDYLPNGRE LKYMTTVAEQ RASNIHVHDG
VDEDAFVGMR EARDATLDMP VLMLPAVQVN MRCGHFPEPE DNGVVYLKIP LNAL
|
|---|
| |