Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0074 |
Symbol | |
ID | 3365549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 77633 |
End bp | 79297 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650417 |
Product | GGDEF |
Protein accession | YP_233186 |
Protein GI | 66043345 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCTACAC CTGTCGAACC CTTGCGATTG CTGCTTTTGG CGCACGAGCC CTTCTGGCAG GCGCTGCTTA GCGGCTGCCT CACTGCGCCG GGAAGCAACG TGATACTTCT GCATGGCGCG AACTGGGACG TTTTCAGCGC CCGCTACGCT AACGAGCGCA ACACCGTGCT GCTGACCACG CCTGATCTGC AGCCCAGGAC CGGGGCCTGT CTGTTGCCTA CCGTGGTGCT GCTTGAGGCC GAACCGCTGG TCGGGCCGAC CGGCGTCAGT GACTGGCTGG TGCGCGACGC CTTGACCGGC GACACGCTTC GGCGCTGCCT GCGCTATGTC CACGAGCGCA GTCGCCTGGA AGACAGCCTG CGACGTCTGG TCGGCCAGGA CCCGTTGACC GGCATCGCCA ACCGCCAGGG GTTTCAGGCG CTGCTCTCGG CTCGCCTGAG CGAAGGCGGC AGCGTGGCGC TGGGGCATCT GGACCTGGAC AATTTTCGCC GCGCCAACGA TTCACTGGGG CATCAGGCCG GTGATCGACT GATCCTGCAA GTGGTGGCGC GCTTGAAAAA CCAGCTCGAT GCCGGTGATC AGATCGCCCG CCTGGGGGGC GACGAATTCG CCTTGTTGAT CGACACCCGA ACAGCCCCCG AACGTGCCCT GCAGATGGCC GAACGTATCA CCGACGTGCT GGCCGAACCC TATTGGGTCG ATGGCGAAAG CCTGTTGCTG GGTTGCAGCC TGGGCATCGC TCACTCCCAG GCCCAGCCCG AAGCCGACCC GCTGATGTGG CATGCACATA TCGCCATGCG TCAGGCCAAG AGCATGCAGG GCTGCACCTA TCACCTGTTC GACGAGCGCA TCAACCGCAA CGCCCGCAGC CTCGCCGATC TGGAAGGTGA ACTGCGACGC GCCTTGCGCC GCGATGAGCT GGAACTGCAT TACCAGCCGC GCCTGTGCCT GGACAGCGGA CGTATCGTCG GCCTGGAAGC GCTGGTGCGC TGGCGCCATC AGGAACGCGG GCTGCTGCCG CCCAGCAAAT TCGTGCCACT GGCCGAGCAA AGCGGCCTGA TCGTGCCGCT CGGCTACTGG GTCATCTTCC GCGCCCTGCG TGACATGCAG GCCCTGCGCG AACAGGGCTT TGCCCCGCTG CACATGGCGA TCAACCTGTC GTTCCGGCAG TTTCAGGACA GCCAGTTGCT GCCGACCTTG ACTCGCCTGA TCGCGGAACA CGATGTCGAC GCGCGCTGGC TGGAGTTCGA ACTGACCGAA ACCGCGGTCA TGCGGCGCAG CGATCAGGTC AGGCAGACCA TGGACGCATT GCGCCAACTG GGCGTGCGCT TTTCGCTGGA CGATTTCGGC ACCGGCTATT CGTCGTTCAT GCACCTCAAC AGCCTGCCCA TCGCGCTGCT CAAGATCGAC ATGACTTTTG TCGGGCAGAT GGAGTTACGC GAAGAGAACC GCAAGCTGGT CAACGCCATG ATCAATCTGG CGCACAACCT GAACCTGGAA GTGGTCGCCG AGGGCGTGGA AACCGCCGGG CAACTGGAGT TGCTGCGCAG TTACGGCTGC AATCAGGTGC AAGGCTATCT GATCAGCCGG CCGCTGCCGG TGGAAGAACT GGTGACCTAT CTGCGTTCGG AAGTGGCACA CGCCGATACC TCCAGATCCG GGTGA
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Protein sequence | MPTPVEPLRL LLLAHEPFWQ ALLSGCLTAP GSNVILLHGA NWDVFSARYA NERNTVLLTT PDLQPRTGAC LLPTVVLLEA EPLVGPTGVS DWLVRDALTG DTLRRCLRYV HERSRLEDSL RRLVGQDPLT GIANRQGFQA LLSARLSEGG SVALGHLDLD NFRRANDSLG HQAGDRLILQ VVARLKNQLD AGDQIARLGG DEFALLIDTR TAPERALQMA ERITDVLAEP YWVDGESLLL GCSLGIAHSQ AQPEADPLMW HAHIAMRQAK SMQGCTYHLF DERINRNARS LADLEGELRR ALRRDELELH YQPRLCLDSG RIVGLEALVR WRHQERGLLP PSKFVPLAEQ SGLIVPLGYW VIFRALRDMQ ALREQGFAPL HMAINLSFRQ FQDSQLLPTL TRLIAEHDVD ARWLEFELTE TAVMRRSDQV RQTMDALRQL GVRFSLDDFG TGYSSFMHLN SLPIALLKID MTFVGQMELR EENRKLVNAM INLAHNLNLE VVAEGVETAG QLELLRSYGC NQVQGYLISR PLPVEELVTY LRSEVAHADT SRSG
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