Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0071 |
Symbol | |
ID | 3365546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 72996 |
End bp | 74972 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650414 |
Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
Protein accession | YP_233183 |
Protein GI | 66043342 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGC CTCGTACCCG AATTGCTTCG CAACTTGGTA TTGCTCTGGC CGTGATCCTG GCGGTGGTTA TCAGTGGTAG TACCCTGTTC GCGTTGAGGT CTCTGGACGC GTCCAACCTG GTCATTCGTG AAGAGCACAT GTCGAGTGAA GCCAGGCTCC TCGCTGACCA GCTCAACACT TTCCACAGCA CGCTGCGCGA CAGCACTCAG CGCCTGAGTG GCCTGTTCGA AAAACGCTTC GCCGCTGGCC TTAGCCTGCA AGCCGACAAG CCGGTCACGG TGGCGGGCAC ATCCACGCCA GGCCTGTTCC TGCGTGATGC CGCGCTGAAC AACGACTTCA CCGAAGTCGA TGAATTCCGC TCGATGACCG CCGGCGTCGC GACCATTTTC GTGCGCAGCG GCGACGACTT CATCCGTATC AGCACCTCCC TGAGCAAGCA GGATGGCACG CGCGCCATCG GCACCGTGCT GGACCGCAAG GGCGCAGCCT ACGAGCGTTT GATCGCCGGG CAGAGCTATG TCGGCAAAGC GGTATTGTTC GATCGCTATT ACATGACCCA GTACAGCCCG GTCCGCGACA GCAGCGGCAA GATCATTGCG GCGCTGTTCG TAGGGTTCGA TTACACCGAT GCGCAGAAGA CCCAGTTCGA TAACCTCAAG AGCTTCCGCA TCGGCTCTAC CGGCTCGCTG GCGCTGCTCG ACGACAAGGG CACCTGGCTG GTTCCACCGG CGGGCGTCAA ATCCCTGGAA GGTGCCGCCA AGTCCGTTGC CGAGCTTGCC AGCAAACCAG GCAAGGCGCA GTTCTGGGAT GACGGGGATG ACAACTATTA CAGCGTCGGC CAGCCGTTCG CCGGCGGCCC CTGGACCGTC ATCGCCAGCA TGCCGCGCAA GGAAATCAGC GAAGTGACCT GGCACGTCGG CACGCAACTG GCGATCGGCA GTCTGCTGGC CATGCTCATC GCCGTGATCA GCGCCATCTG GCTGCTGCGC AGCAAGCTGC GCCCATTGTC TGAACTGGTA CGCCAGGCCG ACGCACTGGG TGCGGGCGAC CTGAGCGTAC GCCTGAATGT GACCAGCAAC GACGAGATCG GGCAGCTGTC CGGCAGCTTC AACAAGATGA GCGAAGCACT GTCATCGATG GTGTCGCATA TCCGTACCGC GGCGCAGGAA GTCAGCACCC GCGCCAACGT GCTGTCCGGC CTGTCGGGCG GTGCGTTCGA GGGCATGGAA CAGCAATCCG GCGAGATCAC CAGCATGGCC GGTGCCGTCG AAGAGTTCAG CGCCACGTCG ATGAACATCG CCGACAACAT GGGCAATACC GAACGCCTGG CCCAGGAAAA TGCCCAGCAG ACACGCATCG GTCGCACCTC GATGGAAGAG GCGTCTTCGT CGCTGCAACA GATCGCCACT TCGCTGAGCA GCACCGCCAA AGTCATCGAC ACGCTGGGCC AGCGCTCGCA GGAAATCGGC AGCATCGTCG GGGTAATCAC CTCGATTGCC GACCAGACCA ACCTGCTCGC GCTCAACGCT GCCATCGAGG CCGCGCGCGC CGGCGAACAA GGTCGCGGCT TTGCCGTGGT GGCTGACGAA GTCCGCAGCC TGGCCTCGCG CACCCGTGAA GCCACCGATG AGATTTCCGG CATGATCGCC AGCATCCAGC AGGAAACCGG CAACGCCATC AGCACCATGC AGCAGGGCAA TACACTGATG CAGGAAGGCC TGTCGCTCAA CGCCAAAGTG GCCTCCGCGC TGGCCCAGAT CGACGAGCAA AGTCGCTCGG CCGGTCACCA GTTCGCCGCC ATCACCACCG CCACCCAGGA ACAAAGCAGC ACTGCGACCA TGCTCAGCAG CAACCTGCAA AGCATCGCCA TGGCCAACAG TGAACAGCGC CAGGTCATGT CCAACCTGGC CATCACCGCC CAGGAGCTGA ATGGCCTGGC GACAGAACTG CGTCACGAGG TTGACCGGTT CCGTTGA
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Protein sequence | MSKPRTRIAS QLGIALAVIL AVVISGSTLF ALRSLDASNL VIREEHMSSE ARLLADQLNT FHSTLRDSTQ RLSGLFEKRF AAGLSLQADK PVTVAGTSTP GLFLRDAALN NDFTEVDEFR SMTAGVATIF VRSGDDFIRI STSLSKQDGT RAIGTVLDRK GAAYERLIAG QSYVGKAVLF DRYYMTQYSP VRDSSGKIIA ALFVGFDYTD AQKTQFDNLK SFRIGSTGSL ALLDDKGTWL VPPAGVKSLE GAAKSVAELA SKPGKAQFWD DGDDNYYSVG QPFAGGPWTV IASMPRKEIS EVTWHVGTQL AIGSLLAMLI AVISAIWLLR SKLRPLSELV RQADALGAGD LSVRLNVTSN DEIGQLSGSF NKMSEALSSM VSHIRTAAQE VSTRANVLSG LSGGAFEGME QQSGEITSMA GAVEEFSATS MNIADNMGNT ERLAQENAQQ TRIGRTSMEE ASSSLQQIAT SLSSTAKVID TLGQRSQEIG SIVGVITSIA DQTNLLALNA AIEAARAGEQ GRGFAVVADE VRSLASRTRE ATDEISGMIA SIQQETGNAI STMQQGNTLM QEGLSLNAKV ASALAQIDEQ SRSAGHQFAA ITTATQEQSS TATMLSSNLQ SIAMANSEQR QVMSNLAITA QELNGLATEL RHEVDRFR
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