Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0062 |
Symbol | hemC |
ID | 3365537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 61471 |
End bp | 62412 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650405 |
Product | porphobilinogen deaminase |
Protein accession | YP_233174 |
Protein GI | 66043333 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTC GCGAAATCCG CATCGCCACT CGCAAAAGCG CGTTGGCACT CTGGCAGGCA GAATACGTCA AGGCCCGCCT GGAACAGGCC CACCCCGGCC TGCTCGTGAC GTTGGTGCCC ATGGTCAGCC GTGGCGACAA ACTGCTCGAC TCCCCGCTGT CGAAAATCGG TGGCAAAGGG CTGTTCGTCA AGGAGCTGGA AACCGCGCTT CTGGAAAACA ACGCCGACAT CGCCGTGCAT TCGATGAAAG ACGTGCCGAT GGATTTTCCA CAAGGCCTGG GCCTGTTCTG CATCTGCGAG CGTGAAGACC CGCGCGATGC ATTCGTCTCC AACACCTTTG CCAGCCTGGA CCAGTTACCG GCGGGCAGCA TTGTCGGCAC CTCCAGCCTG CGCCGTCAGG CCCAATTGCT GGCGCGTCGA CCCGACCTGC AGATCCGTTT CCTGCGCGGC AACGTCAATA CCCGTCTGGC CAAGCTCGAT GCCGGTGAGT ACGACGCCAT CATCCTCGCC GCCGCCGGCC TGATCCGCCT GGGTTTCGAA GACCGCATCA CCTCGGCAAT CAGCGTCGAT GACAGCCTGC CAGCCGGTGG CCAGGGCGCG GTGGGTATCG AATGCCGCAG CGTCGACGCC GAAATTCATG CGCTGCTTGC CCCTCTGCAC CACGAAGACA CCGCCGTGCG CGTGATTGCC GAACGTTCGC TGAACAAGCA CCTCAACGGT GGCTGCCAGG TGCCGATTGC CTGCTACGCC GTGCTGGAAG GCGATGACGT CTGGTTGCGC GGCCTGGTGG GTGATCCGTC CGGCAGCGTG TTGCTGCATG CAGATGCCCG GGCGCCCCAG ACCTCCGCCC AGGCGTTGGG TGTGCAGGTG GCCGAAGCGC TGCTGGAGCA GGGCGCCGCC GACATCCTGA AAGCGGTCTA CGGCGAGGCC AATAACGAAT GA
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Protein sequence | MSSREIRIAT RKSALALWQA EYVKARLEQA HPGLLVTLVP MVSRGDKLLD SPLSKIGGKG LFVKELETAL LENNADIAVH SMKDVPMDFP QGLGLFCICE REDPRDAFVS NTFASLDQLP AGSIVGTSSL RRQAQLLARR PDLQIRFLRG NVNTRLAKLD AGEYDAIILA AAGLIRLGFE DRITSAISVD DSLPAGGQGA VGIECRSVDA EIHALLAPLH HEDTAVRVIA ERSLNKHLNG GCQVPIACYA VLEGDDVWLR GLVGDPSGSV LLHADARAPQ TSAQALGVQV AEALLEQGAA DILKAVYGEA NNE
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