Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0061 |
Symbol | |
ID | 3365536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 60701 |
End bp | 61474 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650404 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_233173 |
Protein GI | 66043332 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCT GGCGTCTGCT GCTGACCCGC CCGGCCGAAG AGTCGGCAGC GCTGGCCAGG GTGCTGGCCG AGGCCGGTAT CTTCAGCAGC AGCCTGCCCC TGCTTGAAAC CGAGCCGTTG CCCTTGACGC CTGCACAGCG TTCGATCATT TTCGAGCTGC TCAATTATTG TGCAGTGATC GTGGTCAGCA AGCCGGCCGC GCGACTGGCC ATCGAACTGA TCGACGAAGT ATGGCCGCAA CCGCCCCTGC AACCCTGGTT CAGTGTGGGT TCAGCAACCG GGCAGATACT GGTCGATTAC GGGCTCGATG CGAGCTGGCC GGAGCAGGGC GACGACAGCG AAGCCTTGCT TGAACTGCCG CGCCTCAAAC AGGCGATTGC CGTACCGGGA AGCCGTGTGT TGATCATGCG CGGTGACGAG GGACGCGAGC TGTTGGCCGA GCAACTGCGC GCGCTGGGGG TGGGCGTTGA TTACCTGCCG CTGTATCGTC GCTATCTGCC GCAGCATGCG CCCGGCGCCC TGGCGCAACG TGTCGCGGTG GAACGCTTGA ACGGGCTGGT GGTCAGCAGT GGGCAGGGTT TTGAACATTT GCTTCAGTTG GCGGGGGATT CATGGCCGGA CCTGGCCGAT CTGCCGCTGT TTGTACCGAG CCCCCGGGTT GCCAGCATTG CGCGGGCAGC CGGAGCAAGG ACCGTTATTG ATTGTCGTGG CGCCAGCGCC ACGGCATTGC TGGCAGCGTT GCGGGAACAA CCTCAGCCTG CCGTCAAGGC GTAA
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Protein sequence | MSGWRLLLTR PAEESAALAR VLAEAGIFSS SLPLLETEPL PLTPAQRSII FELLNYCAVI VVSKPAARLA IELIDEVWPQ PPLQPWFSVG SATGQILVDY GLDASWPEQG DDSEALLELP RLKQAIAVPG SRVLIMRGDE GRELLAEQLR ALGVGVDYLP LYRRYLPQHA PGALAQRVAV ERLNGLVVSS GQGFEHLLQL AGDSWPDLAD LPLFVPSPRV ASIARAAGAR TVIDCRGASA TALLAALREQ PQPAVKA
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