Gene Psyr_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0059 
Symbol 
ID3365534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp58285 
End bp59529 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content63% 
IMG OID637650402 
ProductHemY, N-terminal 
Protein accessionYP_233171 
Protein GI66043330 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID[TIGR00540] hemY protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCT TCTATGTGCT GTTATTCATC GCGATCGCCG CTGCGGCGCT GATCGGGGTC 
GCCATCGCCG AGCATTCCGG CTATGTCCTG ATCGCCTATC AGAACTTCCG CTATGAATCG
AGTCTGTGGG CAACCCTGGC GTTGCTGGTC GTTGCGTTAC TGGTGATCGC ACTGCTGAGG
CTGCTGATCA CCCTGCTGAC GACCTCAGGC CGCGTGGTCA ACCCATGGTC GCGCCGCAAC
CGCCGTCGTC GCGTGCAAAT AGCTATCGAG CAAGGCCAGA TGGACCTTGC CGAGGGCCGC
TGGTCCAGCG CCCAACGTCA TCTGCAACGC GCCGCCGAAG CCGATACGCA TCCGCTGCTC
TACTACATCG GCGCTGCACG TGCTGCCAAC GAGCAGGGCC GTTACGAAGA CTGCGATGCC
TTGCTGGAGC GTGCGCTCGA GCGTCAGCCA CAAGCCGAGC TGGCGATTGC CCTGAATCAC
GCTCAACTGC AGCAGGACCG TGGCGACACC GAAGGTGCGC TGACCACACT GCTGGCCATG
AAAGAGCGTC ATCCGCACAA CCCACAGGTG CTTCGTCAGT TGCAACGCCT GTATCAGCAA
CGTGGTGACT GGTCCGATGT GGTTCGCCTG ATGCCGGAGC TGCGCAAGGA CAAGGTCCTG
CCAGCCAAGG AACTGGCCGA GCTGGAACGC CGCGCCTGGG GCGAAAACCT TAGCCTGGCG
GCGTACCGCG AAGGCATCGA AGGCGCACCG ACCGGTCTGC CTTCACTGGA AAGCGCCTGG
CAGGGGCTGG GTTCTGCGCA ACGTCAGGAG CCGCAACTGG TGCTGGCGTA TGCCGATCAA
TTGCGCCGTC TGGGTGCCGA AGCCCAGGCC GAAGAGGTGC TTCGTAGCGC CCTCAAGCGC
GAGTACAACA GCCATCTGGC GCGTCTGTAT GGACTGGTTC GCGGCAGCGA CCCGTTGAAG
CAGCTGCAAA CGGCGGAGGG CTGGCTCAAG CACCATCCAG CTGATCCAAG CCTGTTGCTG
AGCCTGGGAC GTATCTGTCT GCAAGGTCGA CTGTGGGGCA AGGCGCGGGA TTATCTGGAG
AGCAGTCTGC GCCTGGAGCG CAATCCCGAA ACCTGCGCCG AGCTGGCTCG CCTGCTCGGC
CAACTGGGTG AGACGGATCG CAGCAATCAG CTGTTTCAGG AAGGTCTGGG CCTGCTCGAC
GAGCGCCTCC TGTCGCGCCC CTTGCCGGTG CTGACCAAGG CCTGA
 
Protein sequence
MKRFYVLLFI AIAAAALIGV AIAEHSGYVL IAYQNFRYES SLWATLALLV VALLVIALLR 
LLITLLTTSG RVVNPWSRRN RRRRVQIAIE QGQMDLAEGR WSSAQRHLQR AAEADTHPLL
YYIGAARAAN EQGRYEDCDA LLERALERQP QAELAIALNH AQLQQDRGDT EGALTTLLAM
KERHPHNPQV LRQLQRLYQQ RGDWSDVVRL MPELRKDKVL PAKELAELER RAWGENLSLA
AYREGIEGAP TGLPSLESAW QGLGSAQRQE PQLVLAYADQ LRRLGAEAQA EEVLRSALKR
EYNSHLARLY GLVRGSDPLK QLQTAEGWLK HHPADPSLLL SLGRICLQGR LWGKARDYLE
SSLRLERNPE TCAELARLLG QLGETDRSNQ LFQEGLGLLD ERLLSRPLPV LTKA