Gene Psyr_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0007 
Symbol 
ID3365482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp8233 
End bp9243 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content59% 
IMG OID637650350 
Productaliphatic nitrilase 
Protein accessionYP_233119 
Protein GI66043278 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGC CTTTGAAAGT CGCCTGTGTG CAGGCTGCGC CCGTGTTCCT GGATCTGGAC 
GCCACCGTAG ACAAGACCAT AACCCTGATG GAGCAGGCGG CAGCCGCCGG AGCCGGTCTT
ATTGCATTCC CGGAAACGTG GATTCCGGGC TATCCGTGGT TTTTGTGGCT CGACGCACCG
GCCTGGAACA TGCCGTTGGT GCAGCGTTAT CACCAGCAGT CTCTGGTGCT GGACAGTGTT
CAGGCCCGAC GTATCAGCGA TGCGGCTCGC CATCTCGGTC TCTATGTGGT GCTCGGTTAC
AGCGAGCGCA ACAAAGCGTC GCTGTATATC GGTCAGTGGA TCATCGACGA TCACGGTGAA
ACGGTTGGCG TGCGTCGCAA GCTCAAGGCT ACTCATGTGG AACGTACGAT GTTTGGCGAA
GGCGACGGGG CATCATTGCG TACCTTTGAA ACCCCTGTCG GCGTTCTCGG TGCGCTTTGC
TGCTGGGAGC ACCTGCAACC GCTTTCCAAG TACGCCATGT ACGCACAGAA CGAACAGATC
CACGTAGCGG CCTGGCCAAG CTTCAGCCTG TACCGCAACG CCACGAGTGC CCTGGGCCCC
GAGGTCAATA CTGCGGCTTC GCGGGTTTAT GCCGCAGAAG GGCAATGCTT CGTCCTCGCA
CCCTGTGCAA TCGTTTCCCC TGAAATGATC GAAATGCTTT GCGACAGTGA TGCCAAACGC
AGCCTGCTGC AGGCCGGTGG CGGGCACGCA CGGATTTTCG GTCCGGACGG AAGTGATCTG
GCGACCCCAT TGGGCGAACA TGAGGAAGGT CTGCTCTACG CAACACTTGA TCCAGCCGCA
TTGACCTTGG CCAAAGTAGC AGCCGACCCG GCTGGACATT ACTCACGTCC CGACGTCACT
CGTCTGATGT TCAATCCCAA TCCCACTCCA TGTGTAGTCG ATCTGCCAGA CCTGCCGATC
AGCAGCGAGT CCATCGAGCT GCTTCGGCCT GACATCGCGC TGGAGGTGTG A
 
Protein sequence
MKEPLKVACV QAAPVFLDLD ATVDKTITLM EQAAAAGAGL IAFPETWIPG YPWFLWLDAP 
AWNMPLVQRY HQQSLVLDSV QARRISDAAR HLGLYVVLGY SERNKASLYI GQWIIDDHGE
TVGVRRKLKA THVERTMFGE GDGASLRTFE TPVGVLGALC CWEHLQPLSK YAMYAQNEQI
HVAAWPSFSL YRNATSALGP EVNTAASRVY AAEGQCFVLA PCAIVSPEMI EMLCDSDAKR
SLLQAGGGHA RIFGPDGSDL ATPLGEHEEG LLYATLDPAA LTLAKVAADP AGHYSRPDVT
RLMFNPNPTP CVVDLPDLPI SSESIELLRP DIALEV