Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_2082 |
Symbol | |
ID | 3516059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2557555 |
End bp | 2558256 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670787 |
Product | hypothetical protein |
Protein accession | YP_265363 |
Protein GI | 71066636 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00637879 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCATT CTATTCACGA CGAAGCTCAT CTAAGTAATC GCAATCATTG GCTCAGGGCA GCAGTACTTG GCGCCAATGA TGGATTGATT TCAACCGCGA GTTTATTAGT CGGTGTCGCT GCAGCAAGTA TAAGTAGTCA GACATTGCTA TTAACAGGGA TGGCTGCGTT AACCGCAGGC GCTCTATCGA TGGCAGCTGG TGAGTATATT TCAGTATCGT CTCAAGCAGA TACCGAAAAA GCTGATCTGG ATAAAGAGTT GCATGAACTG ACTCATAACG CTGAGCACGA GCTCAACGAG CTGACTAAAA TTTATGAAAC ACGTGGACTT GATCATGTCT TAGCGCATCA AGTTGCTGTC GCTTTGACTC AGCATGATGC ACTTGAGGCA CACGCCCGAG ATGAGATTGG TTTGACAGAT CTGAGTCAAG CTAAGCCGAT TCATGCCTCA GTTGCTTCTG GATTATCATT CATTGCTGGC GCCATATTAC CGATTATTGG TATTTTGTTA TTGCCAGTGC AATCATTGGT CTGGTCGTTG TCATCTTTGA CCATAGTAGG CTTAGCACTA CTTGGGATAA TATCTGCTCG CTTGGGCGGT GCACCTGTTA TTCCTGCTAC TGCTAGAGTA GTGATTTGGG GTGTGTTAGC GATGGTCGCA ACATCATTGA TTGGAAGATT ATTTGGGGTA GCAGCATTAT AG
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Protein sequence | MHHSIHDEAH LSNRNHWLRA AVLGANDGLI STASLLVGVA AASISSQTLL LTGMAALTAG ALSMAAGEYI SVSSQADTEK ADLDKELHEL THNAEHELNE LTKIYETRGL DHVLAHQVAV ALTQHDALEA HARDEIGLTD LSQAKPIHAS VASGLSFIAG AILPIIGILL LPVQSLVWSL SSLTIVGLAL LGIISARLGG APVIPATARV VIWGVLAMVA TSLIGRLFGV AAL
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