Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_2077 |
Symbol | |
ID | 3516054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2553009 |
End bp | 2554472 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637670782 |
Product | signal transduction histidine kinase sensor |
Protein accession | YP_265358 |
Protein GI | 71066631 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.200991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGTA TTCAGCAACG GCTATTAACA TCGCTACTGA TTGGTCTACC TCTGCTATGG GTACTCACCT CGAGCTTTAT TGCCTGGAAG CTCTGGCACG AAATTAATGA GATGAATGAC ACCCAAATCA CTCAAGTTGC CCGTTACTTA ATAGGGGTCG CCCCTAAAGA AGATGACGAT AAAGACAATC ATGGGCAAGA TGAGAGTAAA AAAGAGCATA CGCCCAAAAT CTATAATTTA AAAAGCAAGC GGCTATCAGG TGATCTGGGT GAGGCTGAAG ATGACTATAT GGGCTTTGCC ATCTGGGATA AAAAAGGACG CCTATTAATG GCTGATGAAA ATGGTCAATC ATTTGCTTTT TTGCCAGACC AGTACGGGTT TTTAGAAGAG CGTGATTCTG CCTATCAGCG TCTCAACCCT TTTAGTAAGC GCTGGCGTTT ATTTTACGTG CATGATGACC ATGACCACGA AGGTCGGGTA ATTGCCGTCG GTCAAAACCT TAAATCTCGC CAAGAGATGA TTGTTGATGC CATGTCCGTA CAACTGCTGC CTATGTTGAT TGGGCTATTT GCATTTATGG GTTTGGTTGT TTGGTTGATT CGACGAGGGT TTATGCCGTT AACTCAGATT AGTAGTGAGC TTGAACAGCG TCAACCGCAA GATGATAGCC CCATCACAGC AGACGTGCCC AAAGAGATTC AACCGTTAGT GAGCGCTTTA AATATCTTAT TTGTAAAAGT CGCGGATACC CTAGCACGTG AGCAACGCTT TACGGCTGAT GCTTCGCATG AGTTAAGAAG CCCGCTGGCA GCATTAAAAT TACAAGCTGA TTTGTTGCAG CAGCAGATAT TGCCATTGTC TGGTGTAGAA GACGATAACC AACTGTTTTA TCATACCCAA AAAATCAGCA ATGGCATTGA GCGTGCCACT CACCTAGTAG AACAACTGCT GATTTTAGCC AAAATAGAAC CACAACAACA ATTACCCCCT GAGCAATTAG AAAGTCCGGA CTGGCTAATG CTTACAGATA TTGTGCTGAG TGATGTCAAC CGTCTCGCTC GTGAAAAGCG CATTCAATTA AAACGCACTG TGAACTGTAA CAATCCTGCT GATATTCTAC CCATCCTTAT CAATCCAACT TTATTCAAAC TGCTCATCCG CAACCTGTTA GACAATGCTA TTCGCTATTG TCCCGAGGGC GCTTTGATTG AACTTCAGCT CGACACCAAT GCCATTAGAG TGGTCGATAA TGGCATTGGT GTCGAGCCAG AACAACTGAC TCGGTTAAGT GAGCGCTTTT ATCGTCCAGC AGGTCAAAGC CAATTAGGTA GCGGTCTTGG GCTATCAATC GCCAATCAAA TAGCTGAGCT GCACAGTCTG ACTTTAGAGT TTGCTAACCG CTCTCAACCA GAAACAGGCT TTATCGTAAC GATAAGAAAT AAAAAAGCGA TATCAAGAAC CTGA
|
Protein sequence | MKSIQQRLLT SLLIGLPLLW VLTSSFIAWK LWHEINEMND TQITQVARYL IGVAPKEDDD KDNHGQDESK KEHTPKIYNL KSKRLSGDLG EAEDDYMGFA IWDKKGRLLM ADENGQSFAF LPDQYGFLEE RDSAYQRLNP FSKRWRLFYV HDDHDHEGRV IAVGQNLKSR QEMIVDAMSV QLLPMLIGLF AFMGLVVWLI RRGFMPLTQI SSELEQRQPQ DDSPITADVP KEIQPLVSAL NILFVKVADT LAREQRFTAD ASHELRSPLA ALKLQADLLQ QQILPLSGVE DDNQLFYHTQ KISNGIERAT HLVEQLLILA KIEPQQQLPP EQLESPDWLM LTDIVLSDVN RLAREKRIQL KRTVNCNNPA DILPILINPT LFKLLIRNLL DNAIRYCPEG ALIELQLDTN AIRVVDNGIG VEPEQLTRLS ERFYRPAGQS QLGSGLGLSI ANQIAELHSL TLEFANRSQP ETGFIVTIRN KKAISRT
|
| |