Gene Psyc_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_2075 
Symbol 
ID3516052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2551648 
End bp2552256 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content44% 
IMG OID637670780 
Productputative nickel-dependent hydrogenase cytochrome b-type subunit 
Protein accessionYP_265356 
Protein GI71066629 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00002288 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.934611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA AAGACATAAT TGATTGGGGC GACGACTCTT CCGTACATTT ACCGAATATC 
CCTAAAGCTA GGCAAGTAAA AGTTTGGGAT ATATTAGTAA GAGTTACTCA CTGGACAGTC
GCGGCTGGTA TTATTGCCAA TCTACTCTTT ACCGAAAACG GCAGTGAGTT GCACGAGTAT
GTAGGCTATA CCGTCTTGGG GCTGGTAGTC ATACGTTTAC TTTGGGGTCT GGTTGGAACG
CGCTATGCAC GTTTTACGAG TTTTTTTCCC ACACCGACAC GACTTAAACG CCACCTATCA
GATTTAAGTG TTCGACGCGT TGATGAGCAG CATCTTGGTC ATAACCCCCC GGCAGCCATG
ATGATGTTAT CGTTATGGGC AGTGATTATA GGGTTAGGAA TAACCGGTTA TCTGATGGAA
GCAGAACTCC TTGGTAATGC AGACCTACTT GAAGAGATTC ATGGGTTATT AGCAAACAGC
TTATATCTGC TTGTTCCTCT ACATATCATC GCAGCGATTG CCATGAGTTA TTGGCAACGG
CAGAACCTCA TTAAGTCAAT GATAACGGGC AAAAAAACGG TGACAGCCAA GCCGTCTACT
ATGACATAA
 
Protein sequence
MSQKDIIDWG DDSSVHLPNI PKARQVKVWD ILVRVTHWTV AAGIIANLLF TENGSELHEY 
VGYTVLGLVV IRLLWGLVGT RYARFTSFFP TPTRLKRHLS DLSVRRVDEQ HLGHNPPAAM
MMLSLWAVII GLGITGYLME AELLGNADLL EEIHGLLANS LYLLVPLHII AAIAMSYWQR
QNLIKSMITG KKTVTAKPST MT