Gene Psyc_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1976 
Symbol 
ID3515950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2437575 
End bp2439149 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content46% 
IMG OID637670678 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_265257 
Protein GI71066530 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0457399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGT CTACTGTTGA TTTGCAAAAA CGTCTAAACC CTGAGAAGCC AAAGGGTTTA 
CCTCTGGTGC TGACGATATT GATTGCGTGG CTGGCAGGCG CAATATTTAT CTTTGCACTC
GCGCCTTATG GCTTTTGGCC AGTGGCTCTG GTCTCTCCGG CGATTTTATA CGCTTTATTA
CTGCCACAGA TGAGTGGTAA GCGGGCGTTT TTTATTGGTC AGGCTTATGG GACAGGGCTT
TGGTGTGTGG GAGCGTTTTG GTTATATACC TCTATTCATG TGTATGGTGA TACGCCAGTA
TGGCTTGCAC TGATTATGAT TGCGCTGATG GGTCTTTGCA TGGGATTATT CCATGGCTTT
TTGGCACTGA CTTTTAATCG ACTGGTTGGT AAGCAGCCCT TGTCATTTGC CGCGCTATGG
ATATTGCAAG AGTGGATGAA GACTTGGCTG TTTACCGGTT TTCCATGGCT GTTTGTCGGT
TATGCATTTA CTGAGCAGTA TTGGCTGTCG TCATTGGCAC CTGTTGCGGG CGTGTTTGCC
GTCTCTTTTG TAGCAGTGTT ATTGGCGGCC AGTATTGTGG AGCTTTTGCG CCGTCGCGGT
GGCTATCTGA TTGCCACGTT TGCGCTGTTA ATCATTAGTA CTTCTTTATG GCTCATCAAT
CCGCAATGGA CGAAGCCAAA GGGCACGCCT GATTTATCGG TGTCGTTAAT TCAGGGCAAT
ATTCCACAAG ACTTAAAATG GCTGACTGAG TACCAGATAG AGACGCTAAA AATTTATGCG
ACTTTGACAA GTACAGAGTG GGGGCGTGAT ATTGTCTTAT GGCCGGAATC TTCTATTCCC
ATGTTTCAAG ATGAAGCAGT TGGCTTTATC AATGAAATGG TGAAAATGGC CAAAGAAACC
GATACCACAT GGGTCACAGG CATTCCTTAT CGAGATCAAG CAGACTTTGA TCCAAAAATG
GATAAGTATC CACCGTTTTA TAATAGTGTG ATTGCGCTTG GTAGCGATGC TGAAGGGATG
TATAAAAAGC AGCGTTTGGT ACCCTTTGGC GAATATATTC CCTTCGAGGG CATGTTAGAT
ATCTTGCCAA ATCTTGCCGG TAGCCAAGAC ATCATGAGCT ATAGCCGCGG TAGTGATAGC
CAATCACCGC TGCGAGTACG TGGGCATAAT CTGGGCGCGG CAGTGTGTTA TGAAGTGGCT
TATCCTGATA CCACACGAAA AAATGCCATC AATACTGATT TTTTATTGAC CATCTCAAAC
GATGCATGGT TTGGCACTTC AGCTGGTCCG CTACAACATT TACAAATGGT ACAGATGCGC
GCGCTTGAAA ACGGACGCTG GTTTATGCGC GCAACCAATA CGGGTGTGAC CGCCATTATT
GATCACAAAG GACGTATCGT AAAACGTGCA CCACAGTTTG AGCGCACCGT ATTACGCGGT
GATATTCAGG CACGTGTCGG TAATACACCT TTTATGCGCT TTGGTAATTA TCCTATTCTA
ATGGTGATTG CTCTGCTGCT GTTATTGAGT TATCTTGGCA AACGAGCAAC GCCTCGAACA
CGTGTAATTG ACTAA
 
Protein sequence
MRLSTVDLQK RLNPEKPKGL PLVLTILIAW LAGAIFIFAL APYGFWPVAL VSPAILYALL 
LPQMSGKRAF FIGQAYGTGL WCVGAFWLYT SIHVYGDTPV WLALIMIALM GLCMGLFHGF
LALTFNRLVG KQPLSFAALW ILQEWMKTWL FTGFPWLFVG YAFTEQYWLS SLAPVAGVFA
VSFVAVLLAA SIVELLRRRG GYLIATFALL IISTSLWLIN PQWTKPKGTP DLSVSLIQGN
IPQDLKWLTE YQIETLKIYA TLTSTEWGRD IVLWPESSIP MFQDEAVGFI NEMVKMAKET
DTTWVTGIPY RDQADFDPKM DKYPPFYNSV IALGSDAEGM YKKQRLVPFG EYIPFEGMLD
ILPNLAGSQD IMSYSRGSDS QSPLRVRGHN LGAAVCYEVA YPDTTRKNAI NTDFLLTISN
DAWFGTSAGP LQHLQMVQMR ALENGRWFMR ATNTGVTAII DHKGRIVKRA PQFERTVLRG
DIQARVGNTP FMRFGNYPIL MVIALLLLLS YLGKRATPRT RVID