Gene Psyc_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1970 
SymboltyrS 
ID3515944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2429332 
End bp2430543 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content44% 
IMG OID637670672 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_265251 
Protein GI71066524 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.362658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000174204 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCGAGA AAACCTACAC TCTAGAAGAA CAGCTTGCCC TTATCCAGCG CGGTGCTCAA 
GAAATCTTAT CTGAAGAGGA TTTGGTTAAA AAGCTGAAAC TAAATCGTCC GCTACGTATT
AAAGCAGGTT TTGATCCTAC CGCGCCTGAC CTACATTTAG GTCATACGGT ATTGATTAAT
AAGCTTAAGC ATTTCCAAGA TTTGGGTCAT GAGATTTATT TTTTAATTGG TGATTATACT
GCCAAAATTG GTGATCCTTC TGGCAAAAAC TCCACCCGTC CGCCATTAAC CGATGAGCAA
ATCAAAGCCA ACGCTGAAAC TTATGCTGAG CAAGTATTCA AGATTTTGGA TAAAGAAAAA
ACCCGCGTGG TCTTTAACTC AGAATGGTTT AACGACATGT CAGCGGCAGA TATGATTCAG
CTTGCCAGTC ACCAAACCGT TTCGCGCATG TTAGAGCGTG ACGACTTCTC CAAACGCTAC
GCGTCGCAAA CCCCAATTGC GATCCATGAA TTCTTATACC CACTGGTACA AGGCTATGAT
TCTATCGCGC TCAAAGCAGA TGTCGAGCTT GGCGGTACCG ATCAAACCTT CAACTTATTA
ATGGGTCGCA CCTTACAAGG TCGTTATGGT CAAGAACAGC AAGTCTGCAT CACCGTACCG
ATTTTAGAAG GGCTTGATGG CGTCAATAAA ATGTCTAAGT CCCTGAATAA TTATGTTGGC
ATTTATGATG CACCTGGTAC CATGTACCAA AAACTACTGT CTATGCCAGA CACTTTAATC
CGTCGCTACT TTGAGTTTTT AAGCTTTAAG CCAATGGAAG AAGTGGAAAA TTTAATGGCA
GAGATGGAAG ATGGACGCAA TCCACAAGAA ATCAAACGTA TCCTTGCTGA AGAGTTGATT
GAACGCTTCC ATGATGCCGA CGCTGCTGCC AATGCTCATA AGTCAGCGGG TAATGTTTTG
GCTGATGGCG AATTGCCAGT TGATTTACCA GAAGTGACAT TAGAGTTGGA AGGACAGGAC
GCATTATTTA TCACCCAAAT CCTAAACCAA GCGGCGCTTG CCAAAAACAG CTCATCGGCT
AAAGATATGA TCAAGCGTGG CGCGGTAAAA GTAGATGGCG AAGTGGTCGA CGCTGGTTTT
AGCTTAACTG CTGGGCAAAC GGTCGTTATC CAAGCAGGCA AAAAAGCCTA TGCGAAAGTA
ACGGTTGATT AA
 
Protein sequence
MTEKTYTLEE QLALIQRGAQ EILSEEDLVK KLKLNRPLRI KAGFDPTAPD LHLGHTVLIN 
KLKHFQDLGH EIYFLIGDYT AKIGDPSGKN STRPPLTDEQ IKANAETYAE QVFKILDKEK
TRVVFNSEWF NDMSAADMIQ LASHQTVSRM LERDDFSKRY ASQTPIAIHE FLYPLVQGYD
SIALKADVEL GGTDQTFNLL MGRTLQGRYG QEQQVCITVP ILEGLDGVNK MSKSLNNYVG
IYDAPGTMYQ KLLSMPDTLI RRYFEFLSFK PMEEVENLMA EMEDGRNPQE IKRILAEELI
ERFHDADAAA NAHKSAGNVL ADGELPVDLP EVTLELEGQD ALFITQILNQ AALAKNSSSA
KDMIKRGAVK VDGEVVDAGF SLTAGQTVVI QAGKKAYAKV TVD