| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1963 |
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| Symbol | |
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| ID | 3515932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2417214 |
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| End bp | 2418503 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637670660 |
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| Product | TRAP-T family transporter large inner membrane subunit |
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| Protein accession | YP_265244 |
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| Protein GI | 71066517 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.351105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0549575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCAG AAATTATTGG TGCCATTGGT TTGTTATGTA TGATTGCGAT GGTCATGCTG
CGTGTTCCTG TTGCACTTGC CATGTTAGGT GTGGGTCTGG TTGGCTTTGG TGCCGTGACA
GCGCCTATTG GTGCTTTACA TATGCTAAAA GACTTACCGG TCGATGTCTT AGCGAAATAT
GATTTTAGTG CCATTCCGTT GTTCATACTT ATGGGCGTCT TCGCCTCTCA TTCTGGTATG
GCAGGAAAGT TATTTGAGGC CACCCGAACT ATCTTTGGCG GCGTAAGAGG CAGTCTAGGT
ATTGCCGGTA TCGGCTCATC TGGTATCTTT GCATCCATTT CAGGGTCGTC ATTGGCGACT
GCTTCTACCA TGACTAAAGT AGCGCTGCCA CAAATGGAGA AGTATGGATA TCAACCAGGC
TTTGCCTGCG GTATTTTAGC CGCTGGTGGT ACTTTGGGGA TCATGATTCC GCCCAGTATT
GCGCTACTGG TCTATGCCAT CTTAACCCAG CAGTCAGTCG GTGATATGTT TATCGCTGGT
TTCTTACCGG GCATGCTTGG CATGGTGATG TATTCAATCA CTGTGATGAT CATGGTGCGT
TGGAAGCCGC ATTTAGCACA ACGCGGGGAG CCTACTTCTT GGAAACAAAA GTTAATCTCT
TTGACAGGTC TTATTCCCTT TAGCTTTATC TTTATCGTGA TTATTGCGGG TATTTTCTTG
GGGTTATTTA CGCCAACAGA AGGCGCTGCA GTTGGTGCAT TTGTATCATG GGCTTATGCC
TTTGCCAAAG GTATGCGCAT GAAAGGGCTG AAGCAATCGC TTATAGAAAC ACTGGCATTA
TCAGCAGTGG TCTTCTTTAT GTTGCTGGGT GCAGAAGCCT TGGGCTATTT TATCTCAGTC
TCTAGAATGT CTTATACGTT AGCGAGTTGG ATTGGTACAC TGGCGGTCAG CCCAATGATA
GTATTGATCT GCATTTTGAT TATGTACTTT CTGTTAGGCC TGTTCATGGA TGCCTTAGCG
ATGCTGGTGA TTACCATTCC GGTGGTGTTT CCTATTATCC TAGCGTTAGG GTTTGATCCA
ATCTGGTTCG GTATCATTGC TGTATTGACG GTAGAGCTTG GACTCATTAC GCCGCCTATG
GGGATGAATA TCTTTGTGAT TAAGGCGATG GCGCCGCATA TTAAGCTGTC CGATATGTTC
AAGGGGGTGA TGCCCTTTAT TGTCTCAGAT TTGGTTCGTC TGGTCATTTT GGTAGCGTTC
CCGGCGATAT CACTGGTGTT GTTAAGTTAG
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| Protein sequence | MSPEIIGAIG LLCMIAMVML RVPVALAMLG VGLVGFGAVT APIGALHMLK DLPVDVLAKY
DFSAIPLFIL MGVFASHSGM AGKLFEATRT IFGGVRGSLG IAGIGSSGIF ASISGSSLAT
ASTMTKVALP QMEKYGYQPG FACGILAAGG TLGIMIPPSI ALLVYAILTQ QSVGDMFIAG
FLPGMLGMVM YSITVMIMVR WKPHLAQRGE PTSWKQKLIS LTGLIPFSFI FIVIIAGIFL
GLFTPTEGAA VGAFVSWAYA FAKGMRMKGL KQSLIETLAL SAVVFFMLLG AEALGYFISV
SRMSYTLASW IGTLAVSPMI VLICILIMYF LLGLFMDALA MLVITIPVVF PIILALGFDP
IWFGIIAVLT VELGLITPPM GMNIFVIKAM APHIKLSDMF KGVMPFIVSD LVRLVILVAF
PAISLVLLS
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