Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1933 |
Symbol | fadA |
ID | 3515903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2381258 |
End bp | 2382430 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637670631 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_265215 |
Protein GI | 71066488 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02445] fatty oxidation complex, beta subunit FadA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.132677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.226024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATTT TAAGTCCAAA AGACGTGGTC ATCGTAGATG GCGTACGCTC AGCAATGGGT AAAACCAAAA ACGGTATGTT CCGTCATGTC CGCGCTGATA GCATGTCTGC TGAATTGGTA CGTGCATTGG TTGAACGTAA TGACTTTGAT CCACGTGACG TTGAAGACAT TATCTGGGGC TGTGTTAACC AGACGCTAGA GCAAGGTTTA AACATCGGTC GTAACATCGG TCTGCTGGCT GGTATCCCAA AGACAGCGGG CGGTCAGACC GTTAATCGTC TATGTGGTTC TTCTATGCAG GCGCTACACA CTGCTGCTGC CCAAATTATG ACAGGCCAAG GTGATGTGTT CATCATCGGT GGTGTTGAGC ATATGGGTCA CGTCGGCATG ATGCATGGCA TTGATCTCAA CCCTGAAGCG TCAAAGCACT ACGCAAAAGC CTCAAACATG ATGGGCTTGA CCGCTGAAAT GCTGGGTCGT ATGAATAACA TTACCCGTGA AGAGCAGGAT GCTTTTGGTC TTGAGTCACA TCGCCGTGCG TGGGCTGCGA CTACTGAAGG TCGTTTTGAC AATGAAATCA TCGGTATCGA AGGTCATGAT GCGGCTGGTC GCTTGCAACT GTGTACCGTT GATGAAGTGA TTCGTCCAGA TGCGACGATG GAGCAAATGC AAAAGCTACG TCCAGCCTTT GATCCAGTAA GTGGTACGGT GACTGCAGCT ACCTCATCTG CATTATCTGA TGGTGCGTCA GCGATGCTCA TCATGAGCGC GCAAAAAGCC AAAGAGTTAG GTCTAAAGCC ACGTGCTCGT ATTCGTAGTA TGGCAGTCGC TGGTTGTGAT GCGGCTATCA TGGGTTACGG TCCTGTACCT GCCACGCAAA AAGCGCTTAA ACGTGCTGGC ATGAGCATCG AAGATATGCA AACGATCGAG CTAAATGAAG CGTTCGCCGC GCAAGGTTTG TCGGTACTTA AAGCTTTGAA CCTGACTGAC AAGCAAGACA TCGTCAACAT CAACGGTGGT GCGATTGCGC TAGGTCATCC ACTAGGCTGT TCAGGTGCTC GTATCACCGT GACATTGCTT AACGCCATGG AGCAGTCAGA TACTGAAATC GGTCTAGCGA CGATGTGTAT CGGTCTTGGT CAAGGTATCT CGACTATTAT TGAGCGTGTT TAA
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Protein sequence | MTILSPKDVV IVDGVRSAMG KTKNGMFRHV RADSMSAELV RALVERNDFD PRDVEDIIWG CVNQTLEQGL NIGRNIGLLA GIPKTAGGQT VNRLCGSSMQ ALHTAAAQIM TGQGDVFIIG GVEHMGHVGM MHGIDLNPEA SKHYAKASNM MGLTAEMLGR MNNITREEQD AFGLESHRRA WAATTEGRFD NEIIGIEGHD AAGRLQLCTV DEVIRPDATM EQMQKLRPAF DPVSGTVTAA TSSALSDGAS AMLIMSAQKA KELGLKPRAR IRSMAVAGCD AAIMGYGPVP ATQKALKRAG MSIEDMQTIE LNEAFAAQGL SVLKALNLTD KQDIVNINGG AIALGHPLGC SGARITVTLL NAMEQSDTEI GLATMCIGLG QGISTIIERV
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