Gene Psyc_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1926 
SymbolpstS 
ID3515896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2374233 
End bp2375387 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID637670624 
ProductABC phosphate transporter, periplasmic solute binding subunit PstS 
Protein accessionYP_265208 
Protein GI71066481 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR00975] phosphate ABC transporter, phosphate-binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0020181 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00465182 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTATT CATTCATGGC AGTAGCAATC GCTAGCACTT TGGTATTAGC CGCTTGTAAC 
CAAACGACCA GCAACAACGA GAGCGATAAA ACCAACGAGC CTGCTACAGC AGCGCCAGCA
AATGCCGCTG CTAGTGGCGA CGCTAGTGCT AGCTCAGCTG AAAGTGCATC GATGAACATT
ACTGGTGCTG GTGCCTCTTT TCCGCAGCCT ATCTATGCTA AATGGTCAGA TGCTTACAAT
AAAGCCACCG GTGGTCAGGT GAACTATCAG TCCATTGGCT CATCTGGCGG TATCAAACAA
ATCGTTGCGA AGACCGTGGA TTTTGGAGCA TCTGATGCGC CTATGACACC AGAAGAGTTA
AACGAAGCTG GTCTGATTCA GTTCCCAACT GTCATTGGTG GCGTAGTGCC TATCGTCAAT
ATCGATGGCA TCAAGGCTGG TCAGTTAAAG CTCGATGGCA AAATGCTTGC CGATATTTAT
TTGGGCAAAA TCAGTAAATG GAACGACCCT GCCATCGCGG CTATGAATCC AGAACTTAAA
TTACCAGACG CTGCCATTAC CACGGTATTT CGCTCGGATG GTTCTGGTAC GACTTTTAAC
TTCACTGACT ATCTAGCAAA AGTTTCAAGC GATTGGAATG ACAGTGTGGG TGTCGATAAA
ACAGTCAAAT GGCCAACATC GGCTACCGGT GCTGGTGGTA AAGGCAACGA GGGTGTGTCG
AGCTACGTCA CACGCATGAA AAACTCTATC GGCTATGTTG AATATGCTTA CGCTAAGCAA
AACGGTATGG CACACGTCGC CCTTAAAAAC GCTGCAGGCA ATATCGTACA ACCTTCTGCC
CAAACTTTTG CAGCGGCAGG CGACATTGAC TGGTCAAAGC AAGAAGGCTT CTATAAAGTT
ATTACCAACT CTGAAACAGC GCAAGCTTGG CCAATCGCCG CGGCGACTTT TATCTTAGTA
CATAAGCAGC CACAAGATGC CAAGCAAGTC GCCGGCGTAT TAAAGTTCTT TGACTGGGCT
TATACTCAAG GTGATGACGA TGCAATGGCG CTTGATTACG TGCCGTTTTC TGATACTGCC
GTTGCTTTGT TTAAAGCAAA ATGGAATGAG GTAAAAGGCA GCGACGGCCA ACCTGTCTAT
AAGCCTGCAC AATAA
 
Protein sequence
MRYSFMAVAI ASTLVLAACN QTTSNNESDK TNEPATAAPA NAAASGDASA SSAESASMNI 
TGAGASFPQP IYAKWSDAYN KATGGQVNYQ SIGSSGGIKQ IVAKTVDFGA SDAPMTPEEL
NEAGLIQFPT VIGGVVPIVN IDGIKAGQLK LDGKMLADIY LGKISKWNDP AIAAMNPELK
LPDAAITTVF RSDGSGTTFN FTDYLAKVSS DWNDSVGVDK TVKWPTSATG AGGKGNEGVS
SYVTRMKNSI GYVEYAYAKQ NGMAHVALKN AAGNIVQPSA QTFAAAGDID WSKQEGFYKV
ITNSETAQAW PIAAATFILV HKQPQDAKQV AGVLKFFDWA YTQGDDDAMA LDYVPFSDTA
VALFKAKWNE VKGSDGQPVY KPAQ