Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1909 |
Symbol | |
ID | 3515879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2357009 |
End bp | 2357968 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670607 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_265191 |
Protein GI | 71066464 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000848653 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0046163 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTAGCC CTACCGCGAT GCCAGCTTGT TTATATATCG TTGCCACGCC GATTGGCAAT CTTAGCGACA TGACACCGCA TGCGATTGAT GTCTTAAAGC AAGTTGCTAT CATTGCCTGT GAAGATACGC GAACCTCAGG TAAGCTGTTG TCACACTTTG GCATTGATAC CAAAGGCAGT AAGGATGACG ATAGCAAAGA AGTCGCGGTG CACAATAATA AAAATGCTGC CGATAGCGAT TCTGATACAG CCGTTAAGCA AAAGGGGCAC AATAAGCTTT GGGCTTATCA TGAGCACAAC AGCGCCATTC AAACGCCAAA AATCATTGAG ATGATCGAGC AAGGTCATTC AGTTGCTCTT ATTAGTGATG CCGGTACGCC GCTGATTAGT GATCCAGGCT ATCAATTGGT ACAAGCAGCA CATGCAGCTG GCGTTCGCGT ATCCCCTATT ATTGGTGCCT CTGCTGCCAT TGCTGCGTTA TCAGTCGCAG GATTGCCATC AGACCGTTTT AGCTTTATTG GTTTTTTACC AGCAAAAACG CATGGTCGCC AAAAACAACT CGCGGCATTG CACTCTCGTA CTGAAACGTT AATATTTTAT GAAGCGCCGC ATCGCATTAT TTCTAGTTTA GAAGATATGG CAACTATATT TGGTGCTGAG CGCGAAGTGA CGTTTTGCCG TGAATTAACC AAAACCTTTG AGACCGTAAA TAAAAGTACG CTTGGCGCTT TGGTCGAATT CGTCAAAGCA GATGACAATC AGCAGCGCGG TGAAATAGTG GTGGTGGTCG CCGGAGCCAA TGTTGCTCAA GATGATGATG ACATCAGCAT TCATGATAAA TTATTACAAC GGCTGCTAGA GGATTTATCG GTGAAAAAAG CCGCTGCCTT AGGCGCTGAT ATTACCGGTA TAAAAAAGAA TGCGCTCTAT CAGCGCTTAC TTGAGCTACA AGCACAATAA
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Protein sequence | MSSPTAMPAC LYIVATPIGN LSDMTPHAID VLKQVAIIAC EDTRTSGKLL SHFGIDTKGS KDDDSKEVAV HNNKNAADSD SDTAVKQKGH NKLWAYHEHN SAIQTPKIIE MIEQGHSVAL ISDAGTPLIS DPGYQLVQAA HAAGVRVSPI IGASAAIAAL SVAGLPSDRF SFIGFLPAKT HGRQKQLAAL HSRTETLIFY EAPHRIISSL EDMATIFGAE REVTFCRELT KTFETVNKST LGALVEFVKA DDNQQRGEIV VVVAGANVAQ DDDDISIHDK LLQRLLEDLS VKKAAALGAD ITGIKKNALY QRLLELQAQ
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