Gene Psyc_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1878 
SymbolaroK 
ID3515847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2314791 
End bp2315351 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content49% 
IMG OID637670575 
Productshikimate kinase 
Protein accessionYP_265160 
Protein GI71066433 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.190429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGG AATTACCGTC GGTATTTTTG GTAGGGCCGA TGGGAGCAGG GAAGACCACA 
ATCGGCAGAT TACTGGCAAA GCAGCTCGGG CGGACGTTTG TAGACAGTGA TTGGTATGTT
GAGTCGCAGA CCGGCGCTGA TATTGCTTGG ATATTCGACA AAGAAGGTGA AGCGGGCTTT
CGCGAACGTG AAACGCGCGC GATAGATGAG CTGACGCAGC AACCGCAAAT TGTCTTAGCG
ACAGGCGGCG GCGCTGTGAT GGCAGCTGAA AATCGTGAAT TTTTAAAGCA GCGCGGTATC
GTCATTTATC TCAATGCGCC TGTCGATGTG CAAATGGCTC GTACCGCTAA AGACAAATCG
CGTCCTTTAT TACAACAGCC TAACCCTAGA AAAATACTGC AAGGTTTATA CAGCGCGCGT
GATCCTTTAT ATCGTCAAGT GGCGCATATT ATTATGCCAA CAGGGCATAC GTATCCACGG
CACATGGTCA ATCAGTTATT ACAGCAGCTT AACTCATTTT GCGCCTCTAC GTCTGTCGTT
TCAGAACCTG AAAAAGACTG A
 
Protein sequence
MVEELPSVFL VGPMGAGKTT IGRLLAKQLG RTFVDSDWYV ESQTGADIAW IFDKEGEAGF 
RERETRAIDE LTQQPQIVLA TGGGAVMAAE NREFLKQRGI VIYLNAPVDV QMARTAKDKS
RPLLQQPNPR KILQGLYSAR DPLYRQVAHI IMPTGHTYPR HMVNQLLQQL NSFCASTSVV
SEPEKD