| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1757 |
|---|
| Symbol | |
|---|
| ID | 3515725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 2164935 |
|---|
| End bp | 2165525 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637670453 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_265039 |
|---|
| Protein GI | 71066312 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.159015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATAG CATCATCGAT GACTATCAGT GAGGGTCAAT TATCAGCAGC CACTTGGCTT
GCATCCCCGA ACGCTAATAA ACGACCTCAA AACACAAGCA TTGATACGAT TGTTATTCAT
AATATCAGCT TACCGCCTAG TGAATTTGGC GCGTGCGGCG CTGATGGTAT ACATTACGTC
AAAGCTTTGT TCACCAATCA ATTAGACTGG GATGCCCATC CTTATTTTCA AACGATAAAA
GGCGCTGAAG TTTCCGCGCA TTTATTTATC GAGCGTGACG GTACGATGAC TCAGTTTGTC
AATTTTAACG AACGCGCATG GCATGCCGGT CGCTCGAGCT ATCTTGGTCG AGCCGAATGT
AATGATTATA GCATTGGCAT TGAGCTTGAA GGGTCGGATT TTGTGCCGTT TAGTGCGGCG
CAGTATGAGG CATTGGCAAA AGCAATCGTT GCAATCTATG AGGCGTATCC CAAAACCCGT
CGGCATCTGA CCGGTCATAG CGATATTGCA CCCGGTCGCA AAACTGACCC CGGTGATTAT
TTTGAATGGA AGAAATTGCG TAAGATGGTT GCCTGCTTTC TTGATGACTA A
|
|---|
| Protein sequence | MSIASSMTIS EGQLSAATWL ASPNANKRPQ NTSIDTIVIH NISLPPSEFG ACGADGIHYV
KALFTNQLDW DAHPYFQTIK GAEVSAHLFI ERDGTMTQFV NFNERAWHAG RSSYLGRAEC
NDYSIGIELE GSDFVPFSAA QYEALAKAIV AIYEAYPKTR RHLTGHSDIA PGRKTDPGDY
FEWKKLRKMV ACFLDD
|
|---|
| |