Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1725 |
Symbol | spoT |
ID | 3515693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2124740 |
End bp | 2126926 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637670421 |
Product | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase:(p)ppGpp synthetase II |
Protein accession | YP_265007 |
Protein GI | 71066280 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.798574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAAA ACTTGCCCAA ACTCAGTCAT CCATTAGTTG ATGATGCTCA ATATAACCTG CTGCGTTCAG TAGGTTATCT CACGGGCGCT GAACGCCGTG ATATTGTTGA TGCCTGTGAG TTCGGTGATG TTGCGCATAT TAAAGACAAG CGCAAGTCAG GGGAGCCTTA TATCACGCAT CCGATTGCTG TCGCTGAGAT ACTGGCAGGC TTTCGCTTGG ATCGAGATAC CATTATTGCT GCAATTTTGC ATGATACGGT TGAAGATACG GAAGTAAGCG ACGAGCAGAT TGAGACGCGT TATGGCAAAG TGGTTTCTAG ACTGGTCGAT GGTGTCACCA AATTAAAATC ATCCACGCAT AATAAACAAG AAAATAAAGC AGCGACCTTT CACAAAATCT TGACGGCTAC CCTCGCCGAT CCGCGGGTAT TGATTATCAA GCTGGCTGAC CGCTTGCACA ATATGTCAAC ACTAGATGCA GTACGTCCTG AAAAACAACG TGCTACCGCG CAAGAGACAT TAGACTTTTA TGTGCCCTTT GCACGGCTCA TGGGTCTTAA CGACATCGCT GATTATATTG AGGTGCTTTG TTATCGCAAC CTTGATTCTG AAATGTATAA CAAGATCTCT GATAAACTGC TACAACATGG GCTCGGGCGC AATTTTCAGA GAGAAGCCAT TCATCGCTAC TTAAGTATTG TTCTAAATAA TCTAGATCTT GATGGCATGG TTAAAGTCTT AGACAATCGT GTTGTCATCT TTCGGCAATT TTTCCGTAAT CGCGGCGAGA TTAATGCGCT ACTACGCCAT TATGCGTTTG AGATTGTGCT GGATAATATC GAAGCTTGCG ACAAACTTGC CTACTATCTC ATTAAAAAAT ATCAAATTGC TGACAGTCAT ATCGCGGATA ATATTCGCAG ACCCTTGCCT GGCGGCAATC AATCGCTTAC CCTTATCTAT GAGCGCGACA ATGATTTTGT CAAAGTGACG ATTTTGACTA AGCAGATGCA AAGTGCGGCA AGGCTTGGGG TCATCGGTGC AGAGCATGCC TCTGATGTCA GTCAATCAGT CATTCAGGCG TCATTGCGCA ATATGAAAGA TTTGGTCGAT GAGGACTGTT TAAGCGAGGG CAACCCTGAC TTTGCCACCG CGGTTTCGAC CATTAACGAG CTGATGGACT ATCTGCATTC CAGCAAAATT ATCTGTTACA GCCCGCAAGG TCGTGCTTAT GAGTTACCAC AAGGAGCGAC TGCGCTAGAC TTTGCTTATG CCGTTGGTCC GATGGTTGGC AATGTCGCTG TTGGTGCTAA TATCGATAAA AAGCCTGCCA AGCTTGGGAC TGTAGTCAAA AATGGACAGT TGGTAGAAAT CGAGGTTAAT AGCCATTCTG AGCCAAAAGC AGAATGGCTT GGGTTTGTGG TTACTAATAA AGCCCGTGTA GAGATTTTGC GGTGGTTCAA AGACTTATCT GTGGCTGATA AGCAGCACCA TGGTAGACAA GCACTAGATC GCGCGCTAAA AACTTATCAA AAAAGCTTGG ATGACCTAAC CGATAGTGAC TGGAAGAATC TAACGGAATG GCGTGGACTG ACTGAGAAAT CAGCGCTATT TGAGCAAATA AGCTCTGGTA CGCTATTGCC GCAACTCGTG GTGACGCGTT TGTTTAGCGA TGAAGTCTGT GATATCCAAT CGCAAGAACG TATCGATGAT ATGACCCAAC CGCAGCAGCT GATTGTCAAT GCTTCGGGCG TTGAGCTTGA TTTTGCCAAT TGTTGTCACC CGATTTATGG TGATCCTATC GTTGGACATT TATCCCGTCA TGGTCTGGTC GTGCATCGAC ATAAGTGCTT TTCACTAGAC GATATTCGTA AAGACAATCC CTATCAAGTC ATCCAATTAC GTTGGCACAA TGATAAAGCG ATCAAGCAAA GTGACTCAGA AGATCACGGT AATAAAATTC GTTTTCCTGC TTATTTAAAA CTGTCTATAG CAATGAGCGA TGAGCAAATC AGTAAAGTTA TTTATAATCT ACGGCAGTTA AATATAGGGG TTGAAAAGGT CGACGTACGT GGCAGCGATA CCATCATTCA TATTGTGGTT CGTAGCCGCA ATCACTTAGC CCAAGGTATT CGTGAACTAC GCTCGTTACT TGGTTTCCCC AATATCATGC GTTTATATCA GCTGTAA
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Protein sequence | MIQNLPKLSH PLVDDAQYNL LRSVGYLTGA ERRDIVDACE FGDVAHIKDK RKSGEPYITH PIAVAEILAG FRLDRDTIIA AILHDTVEDT EVSDEQIETR YGKVVSRLVD GVTKLKSSTH NKQENKAATF HKILTATLAD PRVLIIKLAD RLHNMSTLDA VRPEKQRATA QETLDFYVPF ARLMGLNDIA DYIEVLCYRN LDSEMYNKIS DKLLQHGLGR NFQREAIHRY LSIVLNNLDL DGMVKVLDNR VVIFRQFFRN RGEINALLRH YAFEIVLDNI EACDKLAYYL IKKYQIADSH IADNIRRPLP GGNQSLTLIY ERDNDFVKVT ILTKQMQSAA RLGVIGAEHA SDVSQSVIQA SLRNMKDLVD EDCLSEGNPD FATAVSTINE LMDYLHSSKI ICYSPQGRAY ELPQGATALD FAYAVGPMVG NVAVGANIDK KPAKLGTVVK NGQLVEIEVN SHSEPKAEWL GFVVTNKARV EILRWFKDLS VADKQHHGRQ ALDRALKTYQ KSLDDLTDSD WKNLTEWRGL TEKSALFEQI SSGTLLPQLV VTRLFSDEVC DIQSQERIDD MTQPQQLIVN ASGVELDFAN CCHPIYGDPI VGHLSRHGLV VHRHKCFSLD DIRKDNPYQV IQLRWHNDKA IKQSDSEDHG NKIRFPAYLK LSIAMSDEQI SKVIYNLRQL NIGVEKVDVR GSDTIIHIVV RSRNHLAQGI RELRSLLGFP NIMRLYQL
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