| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1617 |
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| Symbol | tktA |
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| ID | 3515584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1997966 |
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| End bp | 1999963 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637670312 |
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| Product | transketolase |
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| Protein accession | YP_264899 |
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| Protein GI | 71066172 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.804069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCTC CAATTAGCGA ACGTAAATTA GCCAATGCCA TCCGTGTACT GTCGTTCGAC
GCGGTTCAAA AAGCCAATTC TGGGCACCCT GGTGCACCAA TGGGCATGGC TGATATTGCC
GAAGTTTTGT GGCGCAAGTT TTTAAAGCAC AATCCTGCTG ACCCAAGCTG GCACAACCGT
GACCGCTTTG TATTATCGAA CGGTCATGGC TCGATGCTGA TTTATTCATT ACTACATTTA
TCTGGTTATG ACGTCAGTGT TGACGATTTG AAAGGTTTTC GTCAATTACA TTCGAAAACG
CCAGGTCATC CAGAGCTTGG CTATACGCCA GGTGTTGAAA CCACCACTGG TCCACTAGGA
CAAGGTATTG CCAACGCGGT TGGTTTTGCG ATTGCAGAAA AAACATTGGC AGCGCAGTTC
AATCGTGATG GTCATAATAT CGTTGACCAC CATACCTATG CGTTCTTGGG TGATGGCTGC
TTGATGGAAG GTATCAGTCA TGAAGTGTGT TCGCTGGCTG GCACGTTAGA GCTTGGCAAG
TTAGTATTCT TCTATGATGA CAATGGCATC TCAATTGATG GTGACGTCGA AGGCTGGTTT
ACTGATGACA CGCAAGCGCG CTTTGAGTCT TATGGCTGGC AAGTCATCAA GGTAGATGGT
CATGATACCG ATGAGATTAC GCAAGCCACT GAGCAAGCGA TTAAAGAAAC GACTAAGCCT
AGCTTAATCA TTTGTAAAAC GACCATTGGT GCAGGTAGTC CAAACAAACA AGGTTTGGCA
GCCAGTCATG GCGCGCCACT AGGTGATGAT GAAATCGTCT TAACTCGTGA TGCGTTATCT
TGGAAGCATG CGCCGTTTGA ATTGGATGAT GAAATCTATC AAGCGTGGGA TGCCAAAGCC
AAAGGCGATG TACAACAGAA GAACTGGGAC GCGAACTTTG AAGCTTATAA AAAGGCTTAT
CCAGAGTTGG CAGCTGAGTT GGTTCGTCGT TTAGAAGGTG ACTTGCCAGC TGATTTTGAG
CAAAAAGCGC AAGAGTATAT TCAGCAAACT CAAGACCAAG GCGGCGATGT TGCCAGCCGT
AAAGCCAGCC AAAATGCGAT CAATATCTTG CAGCCATTAC TGCCAGAATT GCTTGGTGGC
TCAGCGGATT TAGCGGGCTC AAACCTCACG CTATTTAAAG ACGCCAAAGG TATTCAAGAC
GATGACGCGG GCAACTATAT CTATTATGGT GTGCGCGAAT TTGGTATGAC GGCGATTGCT
AATGGTATCG CGCTGCATGG CGGTTTTATT CCTTATGTTG CTACCTTCCT GATGTTTATG
GAATACGCAC GTAATGCGGT ACGTATGGGC GCGCTCATGA AACAGCGTGT GATTCATGTT
TATACCCATG ATTCTATTGG TTTGGGTGAA GACGGTCCTA CGCATCAGCC GGTTGAGCAA
TTGACCAGCT TGCGCACCAC GCCAAACTTA CGTACATGGC GTCCTTGTGA TGCGACCGAA
TCAGCGAGTG CTTGGGTAGA AGCGATTAAA TCAGAAAACA ATCCATCTGC ATTGATTTTT
AGCCGTCAAA GCTTGCCACA TCAAGCTCGT GATACTGAGC AAGTCGCCAA TATCACTAAA
GGTGGTTATG TACTGGCGAA AGAACAAGGC GAGCTACAAG CGATTATCAT CGCAACTGGT
TCAGAAGTCG GTCTTGCTAT GCAAGCTTAC GCGACCTTAA GCGAAAATGG CGTTGGCGTG
CGCGTGGTCT CTATGCCATG TGCTGAAATC TTTAGCGAGC AAGATGCCAG CTACCGTGAA
GGGGTATTAC CTGCCAATAT CCGCGCCCGA GTCGCTGTAG AAGCAGCACA TGTCGATTAC
TGGTATAAGT TCGTTGGCCT AGACGGTAAA GTCATTGGTA TGACGACTTA TGGCGAGTCT
GCACCTGCTG ATGAGCTATA TAAAGAGTTT GGTATTACTA CTGAAGCTGT GGTTGATGCG
GTAAATAGTT TGGTGTAA
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| Protein sequence | MPAPISERKL ANAIRVLSFD AVQKANSGHP GAPMGMADIA EVLWRKFLKH NPADPSWHNR
DRFVLSNGHG SMLIYSLLHL SGYDVSVDDL KGFRQLHSKT PGHPELGYTP GVETTTGPLG
QGIANAVGFA IAEKTLAAQF NRDGHNIVDH HTYAFLGDGC LMEGISHEVC SLAGTLELGK
LVFFYDDNGI SIDGDVEGWF TDDTQARFES YGWQVIKVDG HDTDEITQAT EQAIKETTKP
SLIICKTTIG AGSPNKQGLA ASHGAPLGDD EIVLTRDALS WKHAPFELDD EIYQAWDAKA
KGDVQQKNWD ANFEAYKKAY PELAAELVRR LEGDLPADFE QKAQEYIQQT QDQGGDVASR
KASQNAINIL QPLLPELLGG SADLAGSNLT LFKDAKGIQD DDAGNYIYYG VREFGMTAIA
NGIALHGGFI PYVATFLMFM EYARNAVRMG ALMKQRVIHV YTHDSIGLGE DGPTHQPVEQ
LTSLRTTPNL RTWRPCDATE SASAWVEAIK SENNPSALIF SRQSLPHQAR DTEQVANITK
GGYVLAKEQG ELQAIIIATG SEVGLAMQAY ATLSENGVGV RVVSMPCAEI FSEQDASYRE
GVLPANIRAR VAVEAAHVDY WYKFVGLDGK VIGMTTYGES APADELYKEF GITTEAVVDA
VNSLV
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