Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1614 |
Symbol | |
ID | 3515581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1994034 |
End bp | 1995677 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637670309 |
Product | glucose-methanol-choline oxidoreductase:GMC oxidoreductase |
Protein accession | YP_264896 |
Protein GI | 71066169 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTG ATGGAAACTT TGATTACGTC ATCGTTGGTG GTGGTTCGGC TGGCTGTGTG CTTGCCAGTC GGCTAACAGA AAACCCAGAC ATCAGTGTCT GCTTATTAGA ATATGGTGGT GAAGGCAAAG ATCTTGCCAT TCGCGTACCT GCTGGACTGA TTTTGATGGT TCCAGGTAAG CCGCTGAAAT TAAACAACTG GTGTTTTCAC ACTACCCCAC AAACGCATCT CAATAACCGC CACGGCTTTC AACCGCGCGG TCAATGTTTG GGCGGCTCAT CGGCTATCAA TGCCATGATT TATACCCGTG GCAGTGCTTT AGACTATGAA CGCTGGGTTG AGCAAGGTTG CACAGGCTGG GGGTTTGATG AGGTGCTTCC CTACTTTATC AAAGCAGAAA ACAACATCCA CGGTAGCGAC GAGCTGCATG GTGATAGTGG ACCACTGCAC GTCAGTGACT TACTGAGCCC GCGTGATATC TCAAAAGCTT TTGTAGAAGC TGCTGTTGCC AATGGTTTAG ATCATAACGT AGACTTTAAT GGCAAAAAAC AAGACGGCGC AGGCTTATAT CAAGTCACTC ATTTTCATGG CGAAAAACAA GGTCAACGCT GCTCCGCTGC TGCCGCTTAT CTGCATCCTG TACAGAGCCG ACCCAATTTA ACCGTTATTA CCCATGCACA AGCCAATCGT ATCATCTTTG AAGACAAACA AGCCGTTGGC ATCGCTTATG AAAAAGATGG CGTCGAACAT ACGGTTATGG CGCGTCACGA AGTCATCTTA TCAGGTGGCA CTTTTGGCTC ACCCAAGGTT CTGATGCTAT CAGGTATTGG TCCTGCCGAG CATTTGCAAT CTCATGGCAT CGATGTGTTG GTAGATGCAC CCGACGTTGG CGGTAATCTA CAAGATCATT TAGACGTCGT CTTTGATTAC GAGGTCAATA CTACCGATGT TATCGGTCTT GGTATGGCGA CGATTTCGAC ATTGGCCAAA AGCATTCGGC AGTGGAGAAA GGATGGTACA GGCTTGCTCT CTACCAATTA TGCAGAAGCG GGCGCGTTCT TCAGTGTTGG TGACGATCCA AAAGAATGGC CAAATACCCA GCTGCATTTT GTCATATCCC GCGTGATTGA ACACGGACGT GATCTCAGAC GTGGTTTTGC CATCTCTTGT CACAGCTGCT ACCTGCGCCC TGAAAGCCGA GGTACAGTCC GACTTGATTC AGCCAACCCC TCTGACGCTG TATTGATTGA TCCAAACTAC CTCTCACACC CAAAAGATGT AGAGTATATG GTGGCTGGTG CTGAACGTAC GCGAGCCATT ATGCAAGAGT CGCCACTGGC TAAATACATC ACTGAGGACT ATCCTGCCCC CTATATCGAA AAAGACGGTA TGCTTGGCTT TATCCGCAAC AAGTCAGATA CCATCTACCA TCCTGTTGGT ACTTGCCGTA TGGGCTCAGA CGGCAATTCA GTAGTCGATT TGGAATTAAA AGTACGGGGC GTAAATGGAT TACGGGTAAT AGATGCCTCA ATCATGCCAA CCTTAATCAG TGGTAATACC AATGCACCGA CGATTATGAT TGCTGAAAAA ATAGCAGACC TTATCAAGGC AAATCACGTG CACGATAAGA CAGTTCCTGC TTAA
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Protein sequence | MELDGNFDYV IVGGGSAGCV LASRLTENPD ISVCLLEYGG EGKDLAIRVP AGLILMVPGK PLKLNNWCFH TTPQTHLNNR HGFQPRGQCL GGSSAINAMI YTRGSALDYE RWVEQGCTGW GFDEVLPYFI KAENNIHGSD ELHGDSGPLH VSDLLSPRDI SKAFVEAAVA NGLDHNVDFN GKKQDGAGLY QVTHFHGEKQ GQRCSAAAAY LHPVQSRPNL TVITHAQANR IIFEDKQAVG IAYEKDGVEH TVMARHEVIL SGGTFGSPKV LMLSGIGPAE HLQSHGIDVL VDAPDVGGNL QDHLDVVFDY EVNTTDVIGL GMATISTLAK SIRQWRKDGT GLLSTNYAEA GAFFSVGDDP KEWPNTQLHF VISRVIEHGR DLRRGFAISC HSCYLRPESR GTVRLDSANP SDAVLIDPNY LSHPKDVEYM VAGAERTRAI MQESPLAKYI TEDYPAPYIE KDGMLGFIRN KSDTIYHPVG TCRMGSDGNS VVDLELKVRG VNGLRVIDAS IMPTLISGNT NAPTIMIAEK IADLIKANHV HDKTVPA
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