Gene Psyc_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1578 
SymbolhemB 
ID3515542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1933859 
End bp1934866 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content45% 
IMG OID637670270 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_264860 
Protein GI71066133 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.296629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.374083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTATA CTTTTAACCG CCAATTCCCT GAAACTCGCC TACGTCGCTT GCGTTATAAC 
GACAATATAC GCTCAATGAT TCGGGAAGTT GAGCTACATC CTAAGCATTT TATCGCGCCG
GTTTTTGTAT TAGAAGGCAC TAACGAGCGT CAACAAATCG CTAGTATGCC AGGCGTTGAG
CGCTTATCAA TTGACCTGCT CATTAAGCAC GCCAAAGACT TGTTAAGTGA AGGCGTTACA
ACCATCGATA TATTCCCAGT GATTGATAAT TCACTAAAAA CACCAGATGG TAGGTCTGCT
TATGATGAAA ATGCTCTCAC TGCGCGTGCG GTAAAAGCGG TCAAAGATGC CGTACCAGAA
ATGGTTGTGA TGACCGATGT GGCGTTGGAC CCTTATACTT CACATGGTCA AGATGGCTTG
CTGGATGACA CAGGCTATGT GATTAATGAT GAAACGGTTG AAGTATTGGT CAAACAAGCG
CTCGTCCATG CGCGTGCCGG CGCTGATATC ATCTCACCTA GTGACATGAT GGATGGTCGT
ATCAAAGCCA TGCGTGATGC CTTTGAAGCT GAAGGTTTTG TGAATACTGC TATTATGGCG
TATTCAGCAA AATATGCCTC CGCTTATTAC GGTCCGTTCC GTGATGCGGT CGGTAGTGCA
GGCAATTTAA AAGGTGGGCA TAAAAAGCAA TATCAGATGG ACTTTGGCAA TCGTGCTGAA
GCCTTGCATG AAGTGGCGAT GGATATCAAT GAAGGCGCTG ACATGGTCAT GATTAAACCG
GGTCAGCCGT ATTTGGATTT AATCCGTGAA GTTAAAAACA CCTTTGGCGT ACCAACGTTT
GCATACCAAG TCTCTGGTGA ATATGCCATG CATATGGCAG CGATTCAAAA CGGTTGGCTC
ACTGATGCCG TTATTTTAGA GTCGTTAATT GGCTTTCGCC GTGCAGGTGC CGATGGTATC
TTGACCTATT TTGCATTAGA AGCAGCAAGA CAACTGAATA ACGCTTAA
 
Protein sequence
MTYTFNRQFP ETRLRRLRYN DNIRSMIREV ELHPKHFIAP VFVLEGTNER QQIASMPGVE 
RLSIDLLIKH AKDLLSEGVT TIDIFPVIDN SLKTPDGRSA YDENALTARA VKAVKDAVPE
MVVMTDVALD PYTSHGQDGL LDDTGYVIND ETVEVLVKQA LVHARAGADI ISPSDMMDGR
IKAMRDAFEA EGFVNTAIMA YSAKYASAYY GPFRDAVGSA GNLKGGHKKQ YQMDFGNRAE
ALHEVAMDIN EGADMVMIKP GQPYLDLIRE VKNTFGVPTF AYQVSGEYAM HMAAIQNGWL
TDAVILESLI GFRRAGADGI LTYFALEAAR QLNNA