Gene Psyc_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1570 
Symbol 
ID3515534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1922067 
End bp1922618 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content44% 
IMG OID637670262 
Productcondensin subunit ScpB 
Protein accessionYP_264852 
Protein GI71066125 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.343062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.779197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTA CAGACGATAC TAAAGAAGAC CTACTGTCTA TTAAAGACAT CAGCAAACAG 
ATCGAAGTTT TACTGCATGC TTCAGAAGTG CCCTTGACTG CTAATCACTT AAAAAAACAC
CTCTCCTTGA CGACTAAGAC CTTAGAGCAG GCTCTAGCAC TGCTAAAGCA ACGTTTGGAT
CTTGGCGTAT TAAATTTACA TCATACTGCC AGTGGTTATC GCTTGCAAAT CGCTGATAGC
CATAGTGCCT TAATCCAAAG CGTCTTTCCA CAACGTCAAG AACGTCTAAG CCAAGCGTTA
CTTGAGACAC TGAGTGTGAT TGCTTATAAG CAACCGGTGA CGCGCAGCGA CATAGAACAT
GTGCGCGGTG TGACGCTATC GAGCACTATA TTACGCCAAC TATTTGATAA AGGTTGGATT
GAAGAGAACG GTCATAAAGA TACTTTAGGG CGTCCGGCAT TGCTGCACAC CACACCGAAA
TTTTTAGATG CCTTTGGACT GAGCCATTTG GATGAGCTGC CGCCCATGCC AGATATAGTT
GAAATACTTT AA
 
Protein sequence
MAATDDTKED LLSIKDISKQ IEVLLHASEV PLTANHLKKH LSLTTKTLEQ ALALLKQRLD 
LGVLNLHHTA SGYRLQIADS HSALIQSVFP QRQERLSQAL LETLSVIAYK QPVTRSDIEH
VRGVTLSSTI LRQLFDKGWI EENGHKDTLG RPALLHTTPK FLDAFGLSHL DELPPMPDIV
EIL