Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1560 |
Symbol | dsbE |
ID | 3515524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1909647 |
End bp | 1910297 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637670252 |
Product | periplasmic protein thiol:disulfide oxidoreductase DsbE |
Protein accession | YP_264842 |
Protein GI | 71066115 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000176573 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.14884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGT CAAATAAGTC TCCTCAAAAA AGTCCTGAGA AAAAAGGCAA GCAAACGATG AAGAAAAGCC AAATCAGAAT ATGGTTTTTG ATTCCGCTGA TCATCTTTGC TGCTTTTATA GTCATGCTAT ATTTTCGTTT AGGTCAGCCT ACCGATATCG TCACCAATAC GGCTCTTGAG CGCCCAGTGC CCGCTTTTGA GCTGCCGTTA TTGTCAGATA CCAGTCGTAT CATGACCAAT GACAACCTGC CAGATCAGCC GTTTTTGATG AATATTTGGG GCTCTTGGTG CCCAACTTGT ATCATTGAGC ATCCTTTTTT AATGCAGTTA GAGGAACGCG GTGTCAATCT GGTGGGCGTC AATTATAAAG ATGATATTGG TGACGCGCTC GGTTATTTAA ATCGAGGCGG TGACCCTTTT TCGATGTCTA TCCAAGATTT ATCCGGTCAA TTTGCCTTAG ATTTGGGTTT GACCGGTGCG CCAGAAACCT TTGTGGTTGA TGGTGAAGGC GTTATTCGTC AGCACATTGT CGGTGAGATT AATGAAAGCA ATTGGCAAAG CCGTATCAGG CCTTGTTTGA TGGTACTCAA TGAGGCGGAT AAGAGCAATG TCAGCCCTGA TCCTGACCAA GTTAAGGAAG CGTGCAAATG A
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Protein sequence | MTQSNKSPQK SPEKKGKQTM KKSQIRIWFL IPLIIFAAFI VMLYFRLGQP TDIVTNTALE RPVPAFELPL LSDTSRIMTN DNLPDQPFLM NIWGSWCPTC IIEHPFLMQL EERGVNLVGV NYKDDIGDAL GYLNRGGDPF SMSIQDLSGQ FALDLGLTGA PETFVVDGEG VIRQHIVGEI NESNWQSRIR PCLMVLNEAD KSNVSPDPDQ VKEACK
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