Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1549 |
Symbol | kdtA |
ID | 3515511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1897307 |
End bp | 1898875 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637670239 |
Product | three-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_264831 |
Protein GI | 71066104 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.207056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.549765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCTT CTGACACCTC AAAAAATCTT TCCGATAACG CTTTGCCTAT GCAAAGCCGA GCGGTACATA AGCCACCTGT TTATTATCAA TTAAGTATTG GTTTACTAAA GCCGCTATAT CGACTACAGG TATGGCGTCG CTCGCATGCG CGTGATAATT ATCAGCAAGA AGTTGAGCAG CGTTTTGGTA AGCGTTATCC TGCGCCTCCT ATAGCGACAC AAACGCCTAT GCCAGCTGCG AATTTAAATA GCAGCAGCAT CAATATTAGT AAGCAAAATA AAACCATCTG GTGCCACGCG GTCTCTTTAG GTGAGACCAA TACCGTTGCG CCATTATTGG ACGTGCTATT GGCTTGTGGT TACCGGATAT GGCTGACCAA TACCACTCAG ACGGGTTTTG CACGCGGTGC CAGCCGATTT GCAGAAGACA TTGCGCAGGG GCGATTAAGT CACAGCTATG TGCCGGTTGA TAGTCCAGCG GTGATTGAAA GGTTTTTAAA TCATGTGCAA CCTATCGCTG CTTTGTTTGT AGAAACGGAG CTATGGGCAA ACATCTTAAC CAAACTGTCT GAGCATCATA TCCCGAGTAT CTTGGTCAAT GGGCGACTGT CAACATCCTC TTTTAAAAGC TATCAAAAGA TTGGGGCGGT AAGCGCAAGC ATGGTGAAAA ACCTGAGCTT AATCATTGCG CAGGATAATG ACTCCGCCAA ACGCTTTCGG CAATTGGGTG CGCATAGCGC CCAGATCCGT GTAGCAGGCT CGCTAAAGTG GGTTATTAAT ACGCCTAAGC TTAATGATAA TGTCGCTGAC ATAGACGGTG ATATAACCCA TAAGCTTACG GATATAGAAG CACGTACGAG TGATATTGCT GCAGATTTAG GTATTATTAA TCGCCCAATT TGGGTGGCAG CAAGTACTCA TAGTGGTGAA GAAAATACGG TACTGTCATG GCAACAGCAA TTACTGTCAA ACTCTGCATT GGCAGAGGTA CTGCTTATTA TCGTCCCAAG GCATCCAGAA CGCTTTGATG AAGTAGCAGC GCTTATCCAA AAATCGGGAT TGATCATGGC GCGGCGCAGT GCAGCAGAGG CTATAGATAT CAACACTCAA GTCTATCTGG CAGACAGTAT GGGCGAACTG ATGAATTGGT ATACGCTTGC AGATGTGGCA TTGGTTGGCG GCTCATTGGT CGAAGTTGGC GGACATAATC CGGTTGAGCC GGCAAGTGTG GCGACACCGG TGTTAATGGG CATTTACACT CAATCTTGCC AAAGCGTCGT GGATAAATTG GCGAGCGTAG GGGCGTTATA TCAGCCAAAC AATGATTTTT ATCGTCCTCT TGATAGTGTT GATCAAGCCA TAAAGCACCC AAAATCTGTA GATAATAAAA TGCTTCTTTG TCAACAGCTA AAATATTGGC TGAGTCATTT AACGTTGGCC AAGCAGGCAG GACAAGCGGG CGCACAGATG ACTGAGCAAC AGCAAGCAGT ATTGAGTCGT CAGTTATCGA TGATCGAAAA GGTTATCGAG CAGCATGCTA TGCAAAACGT TAGCCAAGAT TTAAACTAA
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Protein sequence | MPSSDTSKNL SDNALPMQSR AVHKPPVYYQ LSIGLLKPLY RLQVWRRSHA RDNYQQEVEQ RFGKRYPAPP IATQTPMPAA NLNSSSINIS KQNKTIWCHA VSLGETNTVA PLLDVLLACG YRIWLTNTTQ TGFARGASRF AEDIAQGRLS HSYVPVDSPA VIERFLNHVQ PIAALFVETE LWANILTKLS EHHIPSILVN GRLSTSSFKS YQKIGAVSAS MVKNLSLIIA QDNDSAKRFR QLGAHSAQIR VAGSLKWVIN TPKLNDNVAD IDGDITHKLT DIEARTSDIA ADLGIINRPI WVAASTHSGE ENTVLSWQQQ LLSNSALAEV LLIIVPRHPE RFDEVAALIQ KSGLIMARRS AAEAIDINTQ VYLADSMGEL MNWYTLADVA LVGGSLVEVG GHNPVEPASV ATPVLMGIYT QSCQSVVDKL ASVGALYQPN NDFYRPLDSV DQAIKHPKSV DNKMLLCQQL KYWLSHLTLA KQAGQAGAQM TEQQQAVLSR QLSMIEKVIE QHAMQNVSQD LN
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