Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1536 |
Symbol | rimO |
ID | 3515497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1878243 |
End bp | 1879820 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670225 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_264818 |
Protein GI | 71066091 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0262193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAA TTTCTACCGA GTCCGTTAAT ACGACTATTG CCCCTTCACA GCCAGCTTCT ACTGCCCCAA AAGACACTGC CACTCTCTTT AATCCTGCCA AGCCGACAGC AACGCCCGCG CAAAGCTCTA TAGACAGTGT TCAACCTTAC CACCATAAAG CCAATCATAA TCAAAACCGT AGCATTGCCC AAAGTGGTGA TGCAACTAGC AGCGCGACAG CCTCTAGTTC AGTAACAGCA GCGCCAAAGA TTGGTTTTGT ATCGCTTGGT TGTCCAAAAG CTTTGGTGGA TAGTGAGCGT ATTATTACAG AACTGAGCCG TGATGGTTAT CAAGTTGCTA GTGACTATGA CGGTGCAGAC TTAGTTGTGG TTAATACTTG CGGCTTTATT GAGTCAGCGG TACAAGAGTC GCTAGATGCC ATCGGTGAAG CGATTAGCAA GAACGGTAAA GTGATTGTGA CGGGTTGCTT GGGTAAAGAA GCAGATAAAA TTCGTGAAAT GCATCCTGCC GTGCTAGCCG TGACTGGTGC TCATGCTTAT GACGAAGTGA TTAGAGCAGT TGCACTGCAT GTGCCCAAGC CTGACCGTAG TTTGGATGCC AGTTATGATC CAAAAATAGA TTTGATTAAT GAGGCGGGCA TTAAATTAAC GCCTAGCCAT TATGCCTATC TAAAAATTTC AGAAGGCTGT AACCACCGTT GTACCTTCTG CATTATTCCA AGTTTACGCG GTGACTTGGT TTCGCGTCCG ATTGACAGTG TGATGAATGA AGCACTGGCA CTGAAAAAAG CGGGTGTAAA AGAGCTGTTG ATTATCTCGC AAGATACCTC CGCTTATGGG CTGGATTTAA AGTATAAGAC CAGCTTTTGG AATGGTATGC CGCTTAAGTC AAAATTTTAT GACTTATGCC AAGCGTTAAA CGATTTGGGT ATTTGGGTGC GTCTGCACTA TGTTTATCCG TATCCACACG TGGATAAAGT CGTTGAACTC ATGGGCGAGA AGAAGTTATT ACCGTATTTA GATATCCCGT TCCAACATGC CAGCCATCGC ATTTTAAAAG CGATGAAACG CCCTGCGCAT AGCGAAAATA CCTTGGCGCG TATCCATGCA TGGCGTGAGA TTTGCCCTGA TATCGTTATT CGTTCAACGT TCGTCGTTGG CTTCCCAGGG GAAACTGAAG AAGACTTTCA ATGTTTGCTA GATTGGTTGG TTGAAGCCCG CCTTGATCGC GTTGGTGCTT TTACCTATTC AGAAGTTGAA GGTGCGGTCG CCAATGACTT GCCAAATCAT GTGCCAGAAG ACGTTAAACA AGAGCGCTAT GAGCGTTTGA TGACATTACA GCAAGATATC TCAGCTCAAA AACTGCAAGA AAAAATCGGC AAAACCTTGA TGGTATTGGT GGACGAAATT GATAGAGAAG AGGGCGTAGC GATTTGCCGT AGTTATGCTG ACGCGCCTGA GATTGACGGT CATGTCTATG TCGATGATAT TGACGCTCAC GTCAAAGTCG GACAGTTCTT AACGGTTACC ATCGATGATG CTAGCGAATA TGATTTATTT GCCAGTTATC AAGCCTAA
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Protein sequence | MPKISTESVN TTIAPSQPAS TAPKDTATLF NPAKPTATPA QSSIDSVQPY HHKANHNQNR SIAQSGDATS SATASSSVTA APKIGFVSLG CPKALVDSER IITELSRDGY QVASDYDGAD LVVVNTCGFI ESAVQESLDA IGEAISKNGK VIVTGCLGKE ADKIREMHPA VLAVTGAHAY DEVIRAVALH VPKPDRSLDA SYDPKIDLIN EAGIKLTPSH YAYLKISEGC NHRCTFCIIP SLRGDLVSRP IDSVMNEALA LKKAGVKELL IISQDTSAYG LDLKYKTSFW NGMPLKSKFY DLCQALNDLG IWVRLHYVYP YPHVDKVVEL MGEKKLLPYL DIPFQHASHR ILKAMKRPAH SENTLARIHA WREICPDIVI RSTFVVGFPG ETEEDFQCLL DWLVEARLDR VGAFTYSEVE GAVANDLPNH VPEDVKQERY ERLMTLQQDI SAQKLQEKIG KTLMVLVDEI DREEGVAICR SYADAPEIDG HVYVDDIDAH VKVGQFLTVT IDDASEYDLF ASYQA
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