| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1529 |
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| Symbol | |
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| ID | 3515490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1869116 |
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| End bp | 1871527 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637670218 |
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| Product | putative surface antigen (D15) |
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| Protein accession | YP_264811 |
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| Protein GI | 71066084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000190996 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0121061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACGC CTTTATTTAT GAGCGCGGCT GGGTTGCCGT TAGTTGTAGC AATGATGAGT
ATGCCGGTTC AGGCTGCAGA ATTTGTGGTC ACTGATATTG GCTTTAATGG TCTACAACGC
CTAACACCTG ATAGTTTATA TCCAGTACTG CCTATTACGG TAGGTGATAC GGTCAATGAT
GCAAATCTGG CTGCCAGTAT CAAAGCACTA TATGCGACTG AAAACTTTGC TGACATTCAA
AGCCGTATCG AAGGTGGCAA GCTGCGCTTT GATGTCGTTG AACGTCCGAC GATTGCAGAA
GTTAATTTTG ATGGCAACAA ACTCATTCCC AAAGAAGGGC TTGAGCAAGG CTTAAGTAAT
GCAGGTCTTG CTGTGGGTAA TGTGCTTAAG CAAGCGACCC TACAAGGGGT GGCAAACGAG
CTGCAACAGC AATATATTAG TCAAGGCTAT TACAATAGCA ATATTGAAGT CGATCAGACG
CTGCTTGATG GCAACCGCGT CAAACTTGAC GTACGCTTTA TCGAAGGCAA GCCTGCCAAA
GTCGTCGATA TCAATATCAT CGGTAATAAG CACTTTAGTG ATAAAGAGAT TAAAGAAGTC
TTTGCGGTAA AAGAGTCTTC ATGGACACGT CTGTTATCTA AATCTGACCG TTATGCGAAA
GAGAAGCTCG CGGCAAGTTT AGAGAACCTA AAAGCCCTTT ACCTAAATGA TGGTTATGTA
CGCTTTTCGG TAGATAATGC GGTGCTCAAT ATCAGTGAAG ATAAGAGTAG TGTGTTTATC
GAGGTCAGTC TTAGCGAAGG CGAGCAATAT CAGTTTGGTG AAATTAATTT CTTAGGTAAG
CCGACTTTTG AAACCAGTGA ATTGAAAGAG CTGGTCACTT TTGATGCGAA AGAAAAATAC
TCACAAGCCA AGCTTGATGC TACCACTGCC GCTCTTAAGA GTCGTTATGG TAATGAAGGG
TATTATTTAG CGCAAATTAG ACCAGTACCG CGTATCAATG ACGAGACCAA AGTAGTCGAT
ATCGATTACT ATATTGATCC TGCACGTCCT ATTTATGTTC GCCGTATCAA TTTTACCGGT
AACTTAAAAA CTCAAGATGA AGTATTACGT CGCGAAATGC GCCAGTTAGA AGGGTCACTG
GCTTCTAGTG ACAAGATTCA GCTGTCACGT ACACGCCTTA TGCGTACAGG GTTTTTCAAA
AACGTCAACG TCGATGTCAA GCCTGTTCCT AATCAGCCAG ACCAAGTGGA TGTAAACTAT
ACGGTTGAAG AGCAGCCGTC TGGTAGCTCA ACCATTGCGG CCGGTTATTC ACAAAGTGGT
GGTGTCACCT TCCAGTTAGA TCTGACTCAA AACAACTTTA TGGGCACTGG CGACCGTGTT
AAAGCGGCTT TGTCGCGCTC AGAGACGCGT GATTCTTATA GCTTGGGCTA TACCGATCCA
TATTTCACAG AAAATGGTGT ATCACAAGGT ATCAGTGCTT ACTACCGTGA AACCAAATAC
GATGATAAAA ACGTCAGTAA ATATGTTACC GACGCTTATG GCGCGACGCT GAACTATAGC
TATCCGGTTG ATGAAACCAA ACGCGTCAGT GCTGGCTTAA ACATTGATAA CACGACTGTA
CGTGGCGGTA GCCGTCTTGG TGTGTCAAGC GTTCAGCAGA TTATCGATGA CGGTGGTACG
TTTGAGAAGT TCACTGATAC TGGTCGTACG GGCTTTAAAA ATGAATATCA GAGCTACAAC
TTGCTATTCG GTTGGGATTA CAGCACCTTA GATCGTCCCG TATTTCCAAA TAAAGGCATG
AGCCATACAG TCGATGCGAC CATTGGTTTA GGTGATACCA GTTATCAAAA ACTGGTATAT
CGTGGCAATA TTTATCAACC TATCTACAAA GACTGGGTTG CTCGCGGTTA TACCAAGCTT
GGCTATGGTA ACGATTTACC CTTCTATGAA AACTTCTATG CTGGTGGTTA TGGTTCGGTA
CGTGGCTATG AAGCTTCAAC GCTTGGACCT AAATCACAAA GTTATAATGA CGCTGTTAGT
GAAAATCCTG GTTCATTAAA AGCAGAAGAA ATTGGTGGTA ATGCGTTAGT TAGCTTTGGT
ACCGAATTGA TTTTACCAAT GCCATTTAAG GGTGATTGGG CAGATCAAGT ACGTCCAGTA
CTATTTGCTG AAGGTGGTCA GGTGTTTGAT ACCACGGATA AAGAAAATCG TACCTTTATT
GATCCAGCTA CTGGCGACGA TACTGGTGTA CCACTATTAA CGCAAGACAA TAAGTTGCGC
TTTAGTGCCG GTTTAGGCGT AACTTGGTAT ACGCCAATCG GTCCGATTTC TCTGAGCTAC
GCTGTACCTA TCGGTGATAA AGATGGCGAT GTGACTGAAA AAGTCCAGTT CCAAATTGGT
AACACTTTCT AA
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| Protein sequence | MRTPLFMSAA GLPLVVAMMS MPVQAAEFVV TDIGFNGLQR LTPDSLYPVL PITVGDTVND
ANLAASIKAL YATENFADIQ SRIEGGKLRF DVVERPTIAE VNFDGNKLIP KEGLEQGLSN
AGLAVGNVLK QATLQGVANE LQQQYISQGY YNSNIEVDQT LLDGNRVKLD VRFIEGKPAK
VVDINIIGNK HFSDKEIKEV FAVKESSWTR LLSKSDRYAK EKLAASLENL KALYLNDGYV
RFSVDNAVLN ISEDKSSVFI EVSLSEGEQY QFGEINFLGK PTFETSELKE LVTFDAKEKY
SQAKLDATTA ALKSRYGNEG YYLAQIRPVP RINDETKVVD IDYYIDPARP IYVRRINFTG
NLKTQDEVLR REMRQLEGSL ASSDKIQLSR TRLMRTGFFK NVNVDVKPVP NQPDQVDVNY
TVEEQPSGSS TIAAGYSQSG GVTFQLDLTQ NNFMGTGDRV KAALSRSETR DSYSLGYTDP
YFTENGVSQG ISAYYRETKY DDKNVSKYVT DAYGATLNYS YPVDETKRVS AGLNIDNTTV
RGGSRLGVSS VQQIIDDGGT FEKFTDTGRT GFKNEYQSYN LLFGWDYSTL DRPVFPNKGM
SHTVDATIGL GDTSYQKLVY RGNIYQPIYK DWVARGYTKL GYGNDLPFYE NFYAGGYGSV
RGYEASTLGP KSQSYNDAVS ENPGSLKAEE IGGNALVSFG TELILPMPFK GDWADQVRPV
LFAEGGQVFD TTDKENRTFI DPATGDDTGV PLLTQDNKLR FSAGLGVTWY TPIGPISLSY
AVPIGDKDGD VTEKVQFQIG NTF
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