Gene Psyc_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1476 
Symbol 
ID3515437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1794791 
End bp1795303 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content43% 
IMG OID637670165 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_264758 
Protein GI71066031 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0803852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00053994 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTTGA CTACTCGAGG CAGATATGCC GTTACCGCTT TACTAGATTT GGCATTGCAG 
ACTAGCCAAC AAGACAGTGC GGTGTCTTTA TCCGACATTG CCAAGCGACA ATCCATTTCT
ATCTCTTATC TTGAACAGTT ATTCTCAAAA CTTCGTAAGC GTGGTTTGGT GACCAGTATT
CGCGGTGCAG CTGGCGGTTA TTATTTGGCA AAGCCGCTTG ATCAGATTGA TGTGATGAGC
ATTATCTCTG CTGTCGATGA ATCGGTTAAT GCCATGCAGT GTGAAGGACG TGGCGACTGC
CAAGGTGGTA CAATGTGCTT GACCCATGAT TTGTGGTGTG CATTATCAAA TCATGTGGAG
CAGTACTTGA AAAATATCAC ATTAGCGCAA TTATTAAACA TGGAGCATGT GCAGTCTGTA
TCAGACCGTC AGCACAGCAA TTCTTCAAAA GATATCTCTA TAAAAGACAT TAATACTATT
ACTTTATCGA CCAGCGAGGC AAACCCAGCA TGA
 
Protein sequence
MRLTTRGRYA VTALLDLALQ TSQQDSAVSL SDIAKRQSIS ISYLEQLFSK LRKRGLVTSI 
RGAAGGYYLA KPLDQIDVMS IISAVDESVN AMQCEGRGDC QGGTMCLTHD LWCALSNHVE
QYLKNITLAQ LLNMEHVQSV SDRQHSNSSK DISIKDINTI TLSTSEANPA