Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1476 |
Symbol | |
ID | 3515437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1794791 |
End bp | 1795303 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637670165 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_264758 |
Protein GI | 71066031 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0803852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00053994 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTTTGA CTACTCGAGG CAGATATGCC GTTACCGCTT TACTAGATTT GGCATTGCAG ACTAGCCAAC AAGACAGTGC GGTGTCTTTA TCCGACATTG CCAAGCGACA ATCCATTTCT ATCTCTTATC TTGAACAGTT ATTCTCAAAA CTTCGTAAGC GTGGTTTGGT GACCAGTATT CGCGGTGCAG CTGGCGGTTA TTATTTGGCA AAGCCGCTTG ATCAGATTGA TGTGATGAGC ATTATCTCTG CTGTCGATGA ATCGGTTAAT GCCATGCAGT GTGAAGGACG TGGCGACTGC CAAGGTGGTA CAATGTGCTT GACCCATGAT TTGTGGTGTG CATTATCAAA TCATGTGGAG CAGTACTTGA AAAATATCAC ATTAGCGCAA TTATTAAACA TGGAGCATGT GCAGTCTGTA TCAGACCGTC AGCACAGCAA TTCTTCAAAA GATATCTCTA TAAAAGACAT TAATACTATT ACTTTATCGA CCAGCGAGGC AAACCCAGCA TGA
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Protein sequence | MRLTTRGRYA VTALLDLALQ TSQQDSAVSL SDIAKRQSIS ISYLEQLFSK LRKRGLVTSI RGAAGGYYLA KPLDQIDVMS IISAVDESVN AMQCEGRGDC QGGTMCLTHD LWCALSNHVE QYLKNITLAQ LLNMEHVQSV SDRQHSNSSK DISIKDINTI TLSTSEANPA
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