Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1460 |
Symbol | alaS |
ID | 3515421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1772104 |
End bp | 1774776 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637670149 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_264742 |
Protein GI | 71066015 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.124208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00581407 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCCAGC CATTTCGCTC AGCCGATATT CGTCAAGCTT TTATCGATTT TTTCATAAGC AAGCAGCATA CACCCGTCGC CTCATCGAGT TTGATTCCGC ACAATGACCC GACATTGCTA TTTACCAATG CCGGTATGAA TCAATTTAAA GAAACGTTTT TGGGTATGGA GCCGCGTGAC TATACTCGTG CGGTAACCTC TCAAAAGTGC GTACGTGCTG GCGGCAAGCA TAATGATTTG GATAATGTCG GCTATACCGC ACGCCATCAT ACTTTTTTTG AAATGCTTGG TAACTTCTCT TTCGGCGATT ACTTTAAGCA AGCAGGTATT GGCTATATTT GGGAGTTTTT GACCTCGGAC GAATGGCTTG CGATTGATAA AAATCGCTTA TATGTGACCA TTTACGAAAC CGATGATGAA GCTTTTGATA TTTGGCATAA AGATATCGGC ATACCAAGCG AGCGTATCAT CCGTATTGGT GATAATAAAG GCGCACCTTA CGCCTCAGAT AACTTTTGGA CGATGGGTGA TACGGGTCCT TGCGGCCCTT GTACCGAAGT CTTTTATGAC CATGGCGCAG ATATCGAAGG CGGTCTACCG GGCACGCCTG AAGAAGATGG CGACCGTTAT ATTGAGATTT GGAACTGCGT GTTTATGCAG TTCAACCGTC AAAAAGACGG TACTATGCTG CCGCTACCAG CACCAAGTGT TGATACCGGC ATGGGACTTG AGCGTATCAG CGCCATCATG CAAGGCGTTC ATGGTAACTA CGAGATAGAT TTGTTTGTCC ATCTTATGGA TGCTGCCGCT GAGATTTTAG AGATTGAGAA TCAGCAACAG TCGTCATTAA AGGTCATTGC TGATCATATC CGTGCGGTTT CGTTTTTGAT TGCTGACGGC GTTACGCCAA GTAATGAAGG TCGTGGTTAT GTACTGCGCC GCGTTATTCG CCGTGCAGTA CGTCATGGTA ATAAGCTTGG CGCAGACAGT GATTTCTTTT ATAAAATGGT TGCGCCCTTG GTCGCTGAGA TGGGCATCGC CTACCCTGAG CTAAAAGACA AACAAAGCGT CATCGAAAAC ACCATTCAAA AAGAAGAAGC GCAGTTCGCT AAAACCTTAG CACAAGGTTT ACGTTTACTT GCCAGCGAGC TTGAAGGCTT GCAAGATGGT GATACTCTCT CTGGTGAAGC TGCCTTTAAG CTTTATGATA CTTACGGCTT TCCTGTTGAC TTGACCGCTG ATATCACCCG TGAGCGCGGT ATTGTGATTG ATGAAGCTGA GTTTGATGAA CATATGCAAG CACAGCGTGA ACGTGCGCGT GATGCGGGCA AATTTGACGT TGATTATAGT AGTGTCATTC AAGTAGAGAA CCCAACGACC TTTATCGGTT ATGAACAGCT CGAACAAGAA GGCGTTGCGA TCGATGCCCT TTATCAAGAT GGCAATCCAG CAGACAGCTT AACTGAAGGT ATGGAAGGCG TTGTTGTGCT CGACCGTACG CCGTTTTATG CTGAAGGTGG TGGTCAAGTT GGTGAGCTGG GTGAAATCCG TACCGCGACC GGCGTCTTTG ACGTTCAAGA TACCAAAAAA TCTGGGCAAG CCATTATCCA TTATGGCGTT GTCACTATGG GTGAGATTAA AACTAAACAA ACAGCGGATG CGCAAGTGCT CTCTAGTATC CGTGCTGCCA GTGCCAAAAA TCACTCTGCC ACGCATCTAT TACATGCTGC ACTAAGAGAA GTATTGGGTG ATGCGGTCAC ACAAAAAGGC TCACTGGTCT CAAGCGAAGT CTTACGTTTT GATTTCTCAT ACGACAAGCC TGTTAGTCCC GCTGAAATCA TGCGTATCGA ACGTTTGGTC AATGAGCAAA TCCAAGCCAA TACCCCTACC CGTATTGAGA ATATGCCTAT CGATGAGGCT ATAAAGCAAG GTGCTATGGC GCTGTTCGGT GAAAAATATG GTAATGACGT TCGCGTGCTT ACCATGGGCA CAGACAGTAT CGTAGATGGT CAGCGCATGC CGTTCTCTAT CGAGCTATGT GGCGGTCTAC ATGTACAGCG TACCGGCGAT ATTGGGGTGT TAAAAATTAC TAGCGAATCA GGCATTGCTG CTGGTATTCG CCGTATTGAA GCCGTCACAG CTATGAACGC GATTAAAAAT ATTCAGCAAA GCGAGCAACA GCTCAGCGAG CTTGCGAGTC AGCTAAAAGT GAAACGCCCA GAGGTCGCAC AGCGCGTGCG TACTATGGCG GATAAGCAGC GTGATTTAGA GAAGCAGCTA GAGCGTTTAG AGCAAAAAAT CGCCAGTGCC CAAGCAGCCA ACTTGCTTGA TGAAGTGCAA ACCATCGCAG GTATACCATT GCTTATCAGT ACACTAAGCG GCGTTGATGG TAAATCAATC CGTACACTGA TGGACGATAT AAAATCCAAA CTACCGGATA GTGTGATTGT ATTGATTGGC GATAAAGATG AGCAGTTGGC ATTAGCCGCA AACGTCGCCA AATCAGTGAC TGATCGCATA AAAGCCGGCG ACATCATTCG TTATTTGGCA GGCGAGCTTG GCGGTAAAGG TGGCGGTAAA CCTGACTATG CACAGGGCGG CGCACCAAAG TCTAATAATA GCGCTGCTGT TATCGCGGCC TTACCTGCTT GGGTTGCAGC CCAGCTTAGC TAA
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Protein sequence | MSQPFRSADI RQAFIDFFIS KQHTPVASSS LIPHNDPTLL FTNAGMNQFK ETFLGMEPRD YTRAVTSQKC VRAGGKHNDL DNVGYTARHH TFFEMLGNFS FGDYFKQAGI GYIWEFLTSD EWLAIDKNRL YVTIYETDDE AFDIWHKDIG IPSERIIRIG DNKGAPYASD NFWTMGDTGP CGPCTEVFYD HGADIEGGLP GTPEEDGDRY IEIWNCVFMQ FNRQKDGTML PLPAPSVDTG MGLERISAIM QGVHGNYEID LFVHLMDAAA EILEIENQQQ SSLKVIADHI RAVSFLIADG VTPSNEGRGY VLRRVIRRAV RHGNKLGADS DFFYKMVAPL VAEMGIAYPE LKDKQSVIEN TIQKEEAQFA KTLAQGLRLL ASELEGLQDG DTLSGEAAFK LYDTYGFPVD LTADITRERG IVIDEAEFDE HMQAQRERAR DAGKFDVDYS SVIQVENPTT FIGYEQLEQE GVAIDALYQD GNPADSLTEG MEGVVVLDRT PFYAEGGGQV GELGEIRTAT GVFDVQDTKK SGQAIIHYGV VTMGEIKTKQ TADAQVLSSI RAASAKNHSA THLLHAALRE VLGDAVTQKG SLVSSEVLRF DFSYDKPVSP AEIMRIERLV NEQIQANTPT RIENMPIDEA IKQGAMALFG EKYGNDVRVL TMGTDSIVDG QRMPFSIELC GGLHVQRTGD IGVLKITSES GIAAGIRRIE AVTAMNAIKN IQQSEQQLSE LASQLKVKRP EVAQRVRTMA DKQRDLEKQL ERLEQKIASA QAANLLDEVQ TIAGIPLLIS TLSGVDGKSI RTLMDDIKSK LPDSVIVLIG DKDEQLALAA NVAKSVTDRI KAGDIIRYLA GELGGKGGGK PDYAQGGAPK SNNSAAVIAA LPAWVAAQLS
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