Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1399 |
Symbol | |
ID | 3515357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1691898 |
End bp | 1694069 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637670086 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_264681 |
Protein GI | 71065954 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.693496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAA ACAGCGTAAA TGCCATTAAT GAATTAAACA GTTTTTCTGC AGAATCAGAC AACGGCATTA TCACCGTTAC TATTGATCAA GCTGACCGTA AAATGAACGT GATTGGTGAT GGTTTTAATG AAGCATTTGC GGCATTAACT GATGCATTTA TCAGTGATGC AGAAGCGAAA GGTTTAATTT TAACCTCTGG TAAATCAACC TTTGTGGTTG GGGCAGATAT TGATCAACTA GCCACTATCG AAACTGCTGA GCAAGCGTTT GACTTAGTAG AGGATTTAAA AGCCAGCCTA CGTAAGCTTG AGACTTCTGG CAAGCCAGTG GTTGCCGCAA TTACCGGCAC TGCCTTAGGT GGTGGTTTAG AGCTGGCTTT AGCTTGTCAT TATCGCATCG CTATTGACTC ACCAAAGACA AAACTTGGTT TACCTGAAGT CAAACTTGGT TTATTACCTG GCGGTGGTGG CACTCAGCGT CTTCCACGTC TAGTCGGTAT CCAAAAAGCA CTTGAACTAA TGACGCAAGG TAAAGAGCTT AGCCCACAGC AAGCCGTTGA AATCGGTCTT ATCCATGACG TGGCTTACGA CAATGAAGAG CTTATCAAAA AAGCCAAAAA ATGGATCAAC AACAATCCTC AAGCTAGCCA GCCATGGGAC AATAAAGGTT TTAAGATTCC TGGTGGTGAT AGCAAAAACC CTAAAATAGT ACCGATATTC TCCATTGCTC CTGCGATGGC TAATCAAAAG TCGCACGGCA ACTATCCTGC CATTACCCAT ATCTTATCTA GTGTCTTTGA GGGCTGCTTA ACGGATATCG ACAACGGTCT TAAAATCGAG TCGCGCTTTT TTGTGGCTTG CGCGTTATCA GATGTGTCCA AAAACATGAT TAATACGCTT TGGACGCAGC TTAATAGCAT CAAAAAAGGC CAATCACGCC CTGAAGGGTT TGAAAAATCT AAAGTGAGCA AAGTCGGCAT ACTTGGTGCC GGTATGATGG GCGCAGGTAT CGCTTACGTC TCAGCCAAAG CGGGCATGGA AGTGGTATTG TTAGATACGG CTCTCGAAGG CGCTGAAAAA GGTAAAAACT ATTCTACTAA GTTGTTAGAC AAGGCTATCA GCCGTGGTCA ATCTACTGAA GAGAAAAAAC AAGCGTTATT AGACCTTATC AAAACCACAA CGTCTTATGA CGACTTAGAA GGCTGTGATT TAATTATCGA AGCGGTATTC GAAGATGTAG ACATTAAAGC TGAATGTACG CGTAAATCTG AAGTGGTTAT TCCAGAGACC GCGGTTTATG CATCAAACAC GTCTACCCTG CCTATTACTG AGCTTGCAAG AGCTAGCACA CGTCCAAAAC AGTTCATCGG TCTACACTTC TTCTCGCCAG TAGATAAGAT GCCATTGGTT GAGATTATTG TTGGCGAAGA AACGGATGAT GCAACGCTAG CTAAAGGTTT TGACTATGTT GGTCAAATCG GTAAGACACC GATCGTTGTC AATGACAGCC GCGGCTTCTA TACCTCTCGC GTATTTGGTA CTTACGTATC AGAAGGTATT GCGATGTTAG GTGAAGGTGT TCACCCACGC AGCATTGAAG TGGCTGGTAT GAAATCTGGT ATGCCGATGC CGCCACTCGC ACTGCAGGAC GAAGTGTCAC TAAGTTTGTC ATTACATGTC ATGCAGCAAA CTAAGCGTGC CCTAGAATCG GAAGGCAAAA CCTTTACTCC GCATCCTGCC ATGCCAGTAG TAGAAAAGAT GGTTAATGAG CTTGGCCGCG AAGGTAAGAA AGTCACTAAA GGCTTTTATG ATTATCCTGA AAATGGTGAA AAACGCTTAT GGCCCAAGCT CACTGAACTG TATCCAACTA AAGATGAGCA GCCATCTCAG CAAGACTTGG TAGACCGTTT ATTATACGTT CAAGCTAATG AGACCGCGAA ATGTTTCGAG GAAAATGTCG TACGTACAGT GGCTGATGCC AATGTAGGTT CAATCTTTGG CTGGGGCTTT GCACCAAATC AAGGTGGTAC GCTTCAGTTT GTCAATTCAG TAGGCGTCGA CAAATTTGTT GAACGTAGCC GCGAGCTTGC TAGCAAATAC GGTAAGCGTT TTGAACCTGC TAAAATCTTA GTAGAGATGG CTGAGTCAGG TCAGGAGTTT AGCGATGAGT AA
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Protein sequence | MSTNSVNAIN ELNSFSAESD NGIITVTIDQ ADRKMNVIGD GFNEAFAALT DAFISDAEAK GLILTSGKST FVVGADIDQL ATIETAEQAF DLVEDLKASL RKLETSGKPV VAAITGTALG GGLELALACH YRIAIDSPKT KLGLPEVKLG LLPGGGGTQR LPRLVGIQKA LELMTQGKEL SPQQAVEIGL IHDVAYDNEE LIKKAKKWIN NNPQASQPWD NKGFKIPGGD SKNPKIVPIF SIAPAMANQK SHGNYPAITH ILSSVFEGCL TDIDNGLKIE SRFFVACALS DVSKNMINTL WTQLNSIKKG QSRPEGFEKS KVSKVGILGA GMMGAGIAYV SAKAGMEVVL LDTALEGAEK GKNYSTKLLD KAISRGQSTE EKKQALLDLI KTTTSYDDLE GCDLIIEAVF EDVDIKAECT RKSEVVIPET AVYASNTSTL PITELARAST RPKQFIGLHF FSPVDKMPLV EIIVGEETDD ATLAKGFDYV GQIGKTPIVV NDSRGFYTSR VFGTYVSEGI AMLGEGVHPR SIEVAGMKSG MPMPPLALQD EVSLSLSLHV MQQTKRALES EGKTFTPHPA MPVVEKMVNE LGREGKKVTK GFYDYPENGE KRLWPKLTEL YPTKDEQPSQ QDLVDRLLYV QANETAKCFE ENVVRTVADA NVGSIFGWGF APNQGGTLQF VNSVGVDKFV ERSRELASKY GKRFEPAKIL VEMAESGQEF SDE
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