Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1392 |
Symbol | |
ID | 3515350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1683261 |
End bp | 1685429 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670079 |
Product | pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_264674 |
Protein GI | 71065947 |
COG category | [C] Energy production and conversion [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAAAA AAATAGTTTT GATATTCGCG GTCTTGATTG GCGTCATTGG CTTTTTTTAT TTTGACCTCA ATGAATTATT AACGCTTGAG GGCTTAAAAG GCTCGATGGA TCAGTTCGAG CAATATAAAA CACAGTCGCC ATGGTTGGTC ATCGGCGGCT TTTTTGTAGT ATATATATTG GTCACAGCAT TATCCTTACC GGGCGCAGTT ATTTTAACCT TGGCAGCCGG TGCTTTATTT GGTTTAGTGC AGGGTATACT GGTAGCCTCG TTTGCCTCAA GTATCGGTGC CACACTCGCC TTTTTGACTT CACGCTATTT GTTACGCGAT ACCATTAAAC AGCGTTTTCC TGACCGTCTT GCCTCCATCG ATTCAGGTGT AAAAAAAGAA GGTGGGTTTT ACTTATTTAC GTTACGCCTT GTACCGATAT TTCCCTTTTT TCTCATCAAC TTATTGATGG GTCTGACTGC TATAAAAGTA CGAACCTTTT ATTGGGTCAG CCAAATCGGC ATGCTTGCCG GCACCTTTGT ATTTGTGAAT GCCGGTACAC AGTTGGCAAA AATTGAGCAG TTATCTGGCA TTTTGTCCTT TAATCTACTT GCTTCATTTG CCTTATTAGG GTTATTTCCG CTGATAGCAA AAGGCATATT AACGATACTA AAGAAACGCC GTATCTATAA AAACCATACT AAGCCCAAAA AATTCGACCG TAATATGATT GTGATTGGTG CCGGTGCTGG CGGACTTGTT ACCAGCTATA TTGCCGCGAC CGTCAAAGCA AAAGTCACAT TGATTGAGGC AGGTGAGATG GGCGGCGACT GCTTAAACTA TGGCTGCGTC CCCAGTAAAG CACTAGTAAA AAGTGCAAAA GTGGTTGAGC AGATACGCCA TGGCAAACGT TATGGACTCA ATAATACCCA ACCGGATTTT GCATTTAAGA ACATCATGTC TCGCATCCAT GAAGTCATTG CTGATATCGC CCCAAATGAC AGTGTCGAGC GTTATACGAG CTTGGGTGTC GAGGTATTAA AAGGCTACGC AAAGCTCATT GACCCATGGA CGGTTGAGAT TGCCCTCAAT GATGGCGGCA CTCAAACATT AACCGCGCGC TCTATCGTTA TCGCGACGGG CGCGCGCCCC TTTGTGCCAG ACCTACCAGG TTTAGAAGAG ACGGGTTATG TGACAAGCGA TACTCTCTGG GATAAGTTTG CAAAATTTGA TAAAGTGCCG AGCAAGCTGG TAGTACTTGG CGGCGGACCC ATTGGCTGTG AGCTGGCACA ATCCTTTGCT CGTTTAGGCT CTGCTGTGAC CCAAATCGAA AGAGGCGCGC GGCTGATGAA AAAGGAAGAC GTCGACGTTT CTGTATTTGC GCAAGAAGCA CTGACTGAGA GCGGCGTGAA TATCTTGACC TCACAGCAAG CAATTCGCTG TGAGACTCGC AATGGTAAAA AATATATTAT CGTCGCACCA AAAGGCGGCA ATGATGATCA ACAAGAAACT GCCATTGAGT ATGATGAGTT GATTTGTGCA GTCGGTCGTA GTGCACGCCT AGAAGGTTAC GGACTTGACA CCTTGGGCAT CGACACTGAG CGCACCATCA GTACAGATGA GTATCTTGAG ACGCTCTACC CCAATATCTA TGCGGCAGGT GATATCGTGG GTCCCTATCA ATTCACCCAT GTGGCTGCCC ATCAAGCATG GTACGCTGCG GTCAATGGCT TATTTGGTCA TCTTAAAAAA TTCAAAGTAG ATTATCGCGT GATTCCGTGG TCGACGTTTA TTGACCCAGA AGTAGCACGA GTGGGCTTAA ACGAGCAAGA AGCGATTAAT AAAGGTATTG ATTTTGAAAT CACACGTTAT GACTTCAAAG ACTTAGATCG GGCGGTGACC GAAAGCGCTA ATCATGGCTT TATCAAGGTC ATTACGCCAA AAGGTAAAGA TAAGATATTG GGTGTGACCA TCGTCGCTGA ACATGCAGGT GACTTGATGG CTGAGTTTGT ATTGGCCATG AAACACAATT TAGGGCTGAA TAAAATACTG GGCACCATTC ATATCTATCC AACATGGGCG GAAGGCAATA AGTATGCAGC TGGCGAATGG AAACGCAATC ATGCGCCTAA AAAAGCCCTA CAGTTGCTTG AAAAATATCA TACTTGGCGT CGAGGTTAA
|
Protein sequence | MIKKIVLIFA VLIGVIGFFY FDLNELLTLE GLKGSMDQFE QYKTQSPWLV IGGFFVVYIL VTALSLPGAV ILTLAAGALF GLVQGILVAS FASSIGATLA FLTSRYLLRD TIKQRFPDRL ASIDSGVKKE GGFYLFTLRL VPIFPFFLIN LLMGLTAIKV RTFYWVSQIG MLAGTFVFVN AGTQLAKIEQ LSGILSFNLL ASFALLGLFP LIAKGILTIL KKRRIYKNHT KPKKFDRNMI VIGAGAGGLV TSYIAATVKA KVTLIEAGEM GGDCLNYGCV PSKALVKSAK VVEQIRHGKR YGLNNTQPDF AFKNIMSRIH EVIADIAPND SVERYTSLGV EVLKGYAKLI DPWTVEIALN DGGTQTLTAR SIVIATGARP FVPDLPGLEE TGYVTSDTLW DKFAKFDKVP SKLVVLGGGP IGCELAQSFA RLGSAVTQIE RGARLMKKED VDVSVFAQEA LTESGVNILT SQQAIRCETR NGKKYIIVAP KGGNDDQQET AIEYDELICA VGRSARLEGY GLDTLGIDTE RTISTDEYLE TLYPNIYAAG DIVGPYQFTH VAAHQAWYAA VNGLFGHLKK FKVDYRVIPW STFIDPEVAR VGLNEQEAIN KGIDFEITRY DFKDLDRAVT ESANHGFIKV ITPKGKDKIL GVTIVAEHAG DLMAEFVLAM KHNLGLNKIL GTIHIYPTWA EGNKYAAGEW KRNHAPKKAL QLLEKYHTWR RG
|
| |