Gene Psyc_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1388 
SymbolsgaA 
ID3515346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1678189 
End bp1679364 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content45% 
IMG OID637670075 
Productserine-glyoxylate aminotransferase 
Protein accessionYP_264670 
Protein GI71065943 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTAC AAAACCCAAT TTTTATTCCT GGTCCTACCA ATATTCCTGA CAGACTACGT 
CGCGCGATGA ACGTGCCGAC GCAAGATCAC CGTGCGCCTG ATTTCTCAGA CACTTTCTTA
CCGGTGCTTG CTGATTGTAA AAAAGTATTT GGCACGCAAG ATAGTGAAAT CATCCTGTTT
ACCTCCAGTG GTACGGGCGG TTGGGAAGCT GCTATTAGCA ACACCCTCTC ACCTGGTGAT
AAAGTTCTGA TTGCACGCTA TGGTATGTTC TCCCATCGCT GGATTGATAT GTGTCAGCGC
CACGGACTTG ATGTGCAAGT TATCGAATGT CCTTGGGGTA CAGGCGCACC TGCTGACCAA
TTTCAAGCTA TTTTGAGCGA AGACACAGCG CACGAAATAA AAGCCGTCAT GGTCACACAT
AACGAAACCG CGACAGGTGT CTTAAGCGAC ATTGGCGCCG TTCGCAAAGC CATAGATAGC
AGTAACCACC CCGCTTTATT ATTCGTAGAT GGTGTCAGCT CAATTGCTTC TGTCCCTTTT
GAGATGGATG AATGGGGCGT AGACGTTGCT GTTGCTGGCT CACAAAAAGG CTTTATGCTC
GCAACTGGCA TGGCAATATT AGGCGTCAGT CAAAAAGCCT TGAGTCATAT GGATGAAGCT
AAGCTACCAC GTACTTATTT TGACTTCCGT GATATGTTGA AAGCAAATGC CAACGGCGGC
TTTCCTTATA CACCACCATT AAACCTTATC TATGGTTTAA GAGAAAGTCT TGAGATGTTG
TTTGATGAAG GTCTTGAAAA CGTCTATGCA CGTCATTATC GTTTAGCCGA AGGCGTACGA
CAAGCGGTTA GCGCTTGGGG TATGATATTA TGTGCAAAAA CTCCTGACCT TTATTCTAAT
ACCGTAAGTG CTATCTTTGT TCCTGAAGGC TTTAACAGTA ATAAACTGAC CGATCATGCT
TTTAATAAAT ACGGTATCTC CTTTGGTATT GGTTTAGGTG AGATGAATGG TAAAGCATTC
AGAATAGGTC ATTTGGGTTC ATTGACTGAA GTCATGGTGC TAGCAGGGCT TGCAGCCATT
GAAATGGCAA TGGTTGATTT GGACTACCCT ATTAAACTGG GTCAGGGTGT CGCTGCTGCA
CAAGAGTATT ATCGCAACAC TGCAACAACT AAATAA
 
Protein sequence
MSLQNPIFIP GPTNIPDRLR RAMNVPTQDH RAPDFSDTFL PVLADCKKVF GTQDSEIILF 
TSSGTGGWEA AISNTLSPGD KVLIARYGMF SHRWIDMCQR HGLDVQVIEC PWGTGAPADQ
FQAILSEDTA HEIKAVMVTH NETATGVLSD IGAVRKAIDS SNHPALLFVD GVSSIASVPF
EMDEWGVDVA VAGSQKGFML ATGMAILGVS QKALSHMDEA KLPRTYFDFR DMLKANANGG
FPYTPPLNLI YGLRESLEML FDEGLENVYA RHYRLAEGVR QAVSAWGMIL CAKTPDLYSN
TVSAIFVPEG FNSNKLTDHA FNKYGISFGI GLGEMNGKAF RIGHLGSLTE VMVLAGLAAI
EMAMVDLDYP IKLGQGVAAA QEYYRNTATT K