Gene Psyc_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1368 
Symbolcca 
ID3515325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1651145 
End bp1652332 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content45% 
IMG OID637670054 
ProducttRNA nucleotidyltransferase 
Protein accessionYP_264650 
Protein GI71065923 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.189193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGT ATCTTGTCGG CGGTGCAGTA CGTGATCAGC TATTAGGGCG CCCTATTAAA 
GATAAGGACT TCGTCGTCGT TGGGGCAACG ATTACTGAGA TGCTTGACGC TGGGTTTCAG
CAAGTAGGTG CTGATTTTCC TGTATTTTTG CATCCGATTA GCCGCGAAGA ATATGCGCTA
GCACGAACTG AGCGCAAGCA AGGTATGGGC TATCAAGGTT TTAGCATTCA TGCCAGTTCT
GATGTCAGCT TAAAAGACGA TCTGCAGCGG CGCGATTTGA CCGTCAACGC CATGGCAATA
GAGGTTACTA GCATAACCGA CGATACGCCA ATAAGTGGTG ATGTGATTGA TTATTATGGT
GGACTGGACG ACATAAAAAG CAAGAGTTTG CGCCATGTCT CAAGCGCCTT TAGCGAAGAC
CCTTTACGGG TACTGAGAAC GACACGCTTT TATAGCCGCT ACTACGATTT GGGCTTTACT
ATCGCTGATG ATACGTTAGC CTTGATGCGT GAATTGGTGA ATTCAGGAGA GCTTGCTCAT
TTAAGTAGCG AGCGCATTTG GCAAGAATCG AGCCGCGCGA TGATGCAGCT CTCCCCTCAG
GTGTACTGGC AGCAGCTATT TGATATCGGC GCCCTCACAG AGCACTTTAC GCCATTACAT
CAGGCTTGGA ATGATGTTCA GATACGAGAA ATGGTACAGA CAGCGCTATA TTTTTCTGGT
CAAATGCAAT TAAACTTATC GCAGCGTTGG GCGCTATTGA TGACTAGCCT TCGACCATCG
ATATTTAATA TTAAACCTAG TGATTTAGTA GACTCCGAGG CAGCGATCTC TACCAAGCGC
ATTATTGACA TAGGCAATAT GGCTAAAGTA CCAAAATCTC ATACCCAGTT TGCCAGTTTA
TTCGTACAAC AAGTGGAAAA ACTAACCATT GTCAGTCATA TTACGGCAGC TGAAAAAATA
GACCTTATTC AAGCTTGTAG CGCCCATAAA GCGCCGGAAA AACTATCGCA GCTATTGGTC
ACCAGTCAAG TATTGCAGTT AGCCATACAG CACTGTCAAA TGATGTTGGC ATTGAATAGC
TTCCACGCTA TTGGTATGCA AGATATTGAC CAAAACCTTA AAGGTCCAGC GATTGGTAAA
GCCTTGCGGC AATGCAGAAT TGAGCACTTA CAAACGCAAA CAGCCTGA
 
Protein sequence
MQVYLVGGAV RDQLLGRPIK DKDFVVVGAT ITEMLDAGFQ QVGADFPVFL HPISREEYAL 
ARTERKQGMG YQGFSIHASS DVSLKDDLQR RDLTVNAMAI EVTSITDDTP ISGDVIDYYG
GLDDIKSKSL RHVSSAFSED PLRVLRTTRF YSRYYDLGFT IADDTLALMR ELVNSGELAH
LSSERIWQES SRAMMQLSPQ VYWQQLFDIG ALTEHFTPLH QAWNDVQIRE MVQTALYFSG
QMQLNLSQRW ALLMTSLRPS IFNIKPSDLV DSEAAISTKR IIDIGNMAKV PKSHTQFASL
FVQQVEKLTI VSHITAAEKI DLIQACSAHK APEKLSQLLV TSQVLQLAIQ HCQMMLALNS
FHAIGMQDID QNLKGPAIGK ALRQCRIEHL QTQTA