Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1365 |
Symbol | |
ID | 3515322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1644926 |
End bp | 1646329 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637670051 |
Product | Delta-9 acyl-phospholipid desaturase |
Protein accession | YP_264647 |
Protein GI | 71065920 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000311769 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCAA AAAAAGCACT TGGCTTACCG CTTAAAGGCT TACGTTTCGC TATCAAATCT GGTGACACAC TTATCAAAAC TGCCAGCACT CAAGTCACAC GTTTTAAAAC ACGTTTTGAT GAGAATAAAG CAAAAAACTC ATTAGATGAG ATGCCAGTTG CCAAACGCAA TTACGCGAGC GTCTCTGAAC AAACTGAACT GTCTACCAAT GCAGACAGTA TTGATATGCG TGAGTTTGAG TTTACCAAAG CACCGATTAA CTGGATTCCA GCGACTATTC TGGTAGCCAC GCCTATTGCT GCTGCTATCA TTACGCCATG GTATCTGTTT ACCCATCAAG TCAGTGCACC GGTTTGGGGT GTATTTGGTG CTTTTATGGT TTGGACGGGC ATCAGTATCA CAGCAGGTTA TCACCGTTTA TTGTCGCATC GTGCTTATAA AGCGCATCCA ATCGTCAAAA ACTTTTTATT GTTAGGTTCT ACCTTTGCCG TACAAGGTTC AGCGTTTGAT TGGGTTTCTG GTCACCGTAC GCATCATCGT CATGTCGATG ATCGCTTAGA AGACCCGTAC TCAGCGAAAC GTGGCTTTTT CTTTAGTCAT ATGGGCTGGA TGTTACGCAA TTATCCTAGC GGCAAATTTG ACTATAAAAA TATCCCTGAC CTGACCAAAG ATAGAACGCT GCAAATTCAG CATAAATATT ACGGTTTATG GGTCGCTGCA TTGAACGTCG GTGCAGTCGC CGCGATCGGC TGGTTACTGG GTGATGTTTG GGGTACTTTG GTCATCGTCG GTTTGCTACG TCTGGTACTG ACGCATCACT TTACCTTCTT TATCAATTCG CTATGTCATA TGTTTGGGTC GCGTCCTTAT ACCGACACTA ATACTGCCCG TGATAACTTC TTCTTAGCTA TCTTTACGTG GGGTGAGGGT TATCACAACT ACCATCACTT CTTCCAGTAC GATTATCGTA ATGGCGTAAA ATGGTGGCAG TATGATCCAA CCAAATGGTT AATCGCTGGC TTATCGAAGC TGGGCTTAAC CAGTGAGCTA CGTACCGTTG ATGACACCAC TATCAAGCAT GCTGAAGTAC AAATGCAATT CAAAGCGGCG CAGCAGCAGA TTGATACGGC AACATCAAGT GGTATTGATA TTCCTCATGC GATGAAAAGC TTCCAAGATC GTATTAAGTT TGAATACGAT GCCTTTACGC AAACGGTCGA AGAATGGCAA GCATTAAAAG CAAAAACCAT TGAGCTGAAA AAGACCGAAT TTGCAGATCG CTTGCATGAA GTTGAGGATG AGCTGAAAAA TGATTATGCC AAAATTGAAG AAAAAATATT AGCGCATAAT AGCAACCTAA AAACAGCATT TCGCTCTATC GATAAAAGCG CAAAAGCTGC TTAA
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Protein sequence | MIAKKALGLP LKGLRFAIKS GDTLIKTAST QVTRFKTRFD ENKAKNSLDE MPVAKRNYAS VSEQTELSTN ADSIDMREFE FTKAPINWIP ATILVATPIA AAIITPWYLF THQVSAPVWG VFGAFMVWTG ISITAGYHRL LSHRAYKAHP IVKNFLLLGS TFAVQGSAFD WVSGHRTHHR HVDDRLEDPY SAKRGFFFSH MGWMLRNYPS GKFDYKNIPD LTKDRTLQIQ HKYYGLWVAA LNVGAVAAIG WLLGDVWGTL VIVGLLRLVL THHFTFFINS LCHMFGSRPY TDTNTARDNF FLAIFTWGEG YHNYHHFFQY DYRNGVKWWQ YDPTKWLIAG LSKLGLTSEL RTVDDTTIKH AEVQMQFKAA QQQIDTATSS GIDIPHAMKS FQDRIKFEYD AFTQTVEEWQ ALKAKTIELK KTEFADRLHE VEDELKNDYA KIEEKILAHN SNLKTAFRSI DKSAKAA
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