Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1291 |
Symbol | xseA |
ID | 3515248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1554649 |
End bp | 1556199 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669979 |
Product | exodeoxyribonuclease VII large subunit |
Protein accession | YP_264575 |
Protein GI | 71065848 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00804407 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAAC CCAATCTTTC AAGTACCAAG CACACTAAAG TATTAGCGCC TGCCAAAGAT TTAGCGACCT TGGAGGCAGA ACTAGCAGAA AAAGAAAACA GTCTAGAAGG TAACTTAGAA GATACCGTCC TGTGCCTTAG TGATTACTTG TCAGCGGTCG ACATGGTGAT CAAGCAGACC TTTAATCACC GTGTCTGGGT CAAAGCTGAG ATTCGAAATT TATCCAGTAA AGGTGGGCAT TATTACTTTG AATTAGCAGA AAAAGATGAC GACGGCAAAG TCATTGCCAG CTGCCGTGGT AACCTGTGGC GCTTTAAAGC CGTGCGTGTC TTAGCCAAAT TTGAGCGGGC AACGGGTATG CCACTGGATC GCGATTTAAC GGTTTTATTA AAAGTATCGG CAGGCTTCCA TGCGCAGTAT GGCTTTTCGC TCACCATTGA AGATATTGAC CCCAGCTATA CGTTAGGCGA TTTGGCGCGT CAATATGCTG AGATGGTCGA CCGCTTGGCA GGTGAAGGAC TATTACACCT TAATCAGCAG CTGCCCACCC CGTTTGATAT CGAGCATGTA TTGGTCATCG CTCCTGAAAA AGCAGCAGGG CTAGGCGATT TTCAAGCGGA CGCCAATAGA CTCGCTAGTA CAGGCGCTTG TCATTTTCAT TATCATAACG CCACGTTTCA AGGCAATCAT GCCCCAGCGG AAATACGCCA AGCAATCATC AGCGCCCAGC AGCAATTTCA AGATATCTAT CAGCGTCTAC CAGACTTATT AGTAATTATT CGAGGAGGTG GCGCTGTCGG TGACTTGGCC TATCTGAACG ATTATGAGCT TGCCGCTTTA GTTGCTGAAC AGCCTATCCC TGTTTGGGTT GGGATTGGTC ATGAGCGTGA CAAAGTCATC TTAGATGAAG TTGCACATAC TAGCTTTGAT ACACCATCCA AAGTTATTGC TGCTATCAGC GCTCACTTAG CACAGCTGGT CGCTCAAACT TTGCAATATC AAATGCAAAT TAAACAAGCG GCTCAGCGTC AATTAAATAC AGCGATGCAG CAGACCTCAA GGCAATTGAG CCAGATACAA TCACAAACGA TTGGTCAATT AACAGCACTA CAAAAAGACA GTGCTTATGC GTGGCGTAGC ATTCAACAAA GTGCAAATCG CCAAGTAAAG CAGGCAGCAA GACAAGCAAG CGAGCTGCAT ACACAGACTC AATCCTCTGT ATATCAACAA CTTTCACTCG CCTCTACTTA TAGTAAAAGC CATCAGAAAA CCATGATGCA AAGTGCTCAG CAGCAACTAA TACAAGCACA GCGAAATAGT GAGCATCTGC GTGATATCGT ACTTTTACAT CGACCGTCTC GCGTACTGAA GCAAGGCTAT AGCATACTCA CTGATGAAAA AGACAAACGA ATACTGACCA GTAGCAACCA GCTTTACCCT GAGCAAACCA TTCATATCGC CTTAAAAGAC GGTAAAGCAA AAGCGCAGAT TATTGACATT AAGATGAATA AAAAACCCAC AGAATCCACA GAAGTTTCAA CCTATAGTTG A
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Protein sequence | MRKPNLSSTK HTKVLAPAKD LATLEAELAE KENSLEGNLE DTVLCLSDYL SAVDMVIKQT FNHRVWVKAE IRNLSSKGGH YYFELAEKDD DGKVIASCRG NLWRFKAVRV LAKFERATGM PLDRDLTVLL KVSAGFHAQY GFSLTIEDID PSYTLGDLAR QYAEMVDRLA GEGLLHLNQQ LPTPFDIEHV LVIAPEKAAG LGDFQADANR LASTGACHFH YHNATFQGNH APAEIRQAII SAQQQFQDIY QRLPDLLVII RGGGAVGDLA YLNDYELAAL VAEQPIPVWV GIGHERDKVI LDEVAHTSFD TPSKVIAAIS AHLAQLVAQT LQYQMQIKQA AQRQLNTAMQ QTSRQLSQIQ SQTIGQLTAL QKDSAYAWRS IQQSANRQVK QAARQASELH TQTQSSVYQQ LSLASTYSKS HQKTMMQSAQ QQLIQAQRNS EHLRDIVLLH RPSRVLKQGY SILTDEKDKR ILTSSNQLYP EQTIHIALKD GKAKAQIIDI KMNKKPTEST EVSTYS
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