Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1201 |
Symbol | |
ID | 3514099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1441922 |
End bp | 1442791 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669890 |
Product | short chain dehydrogenase |
Protein accession | YP_264486 |
Protein GI | 71065759 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0718298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0224844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATA AATTACTGAG CCTAATAGCA AAAACGGCTA CCAAAAGTAA AAGTCAATTA TTTAGTGCCA TACAGCCAGC ACGTTATTTA AAAGGTTTGA ATAAACAGCA GGTTGGTCGC GGTAAAACGA TTTTAATCAC TGGTGCCAGC TCAGGATTGG GCGAGGGAAT GGCGAGATTG TTTGCTAAGC TCGGATATAA CCTTGCTATT TGTGCGCGTC GTATGGATCG TTTAGAGAGT CTACAAACAG AGCTGATGGC ACAATATCCT GATATTCGTA TCGAGTATCG AGTGCTAGAT GTTAGTGATT ATGATGCGAT TTTTGAAGTG TTTGACGCTT TCGCTGCTGA TTTCGGTCAT ATCGATCGTG TCGTGGTCAA TGCGGGCATT GGTGAAAGTC GCCGTATTGG TAAAGGGCGT TTCGATACCA ACCGCCGTAC GGTTGAGATC AATTTTATCT CGGCGCTTGC GCAGTGTGAA GCAGCGATGA GTATCTTTCG TGAACAAGGT AGCGGTCATC TGGTCGTGAT ATCTAGTATG TCAGCGATGC GCGGATTACC TAAGCATTTG ACTGCCTATG GTGCGAGTAA AGCAGGATTG GCGCATCTGG CAGAAGGTAT CCGTGCTGAT ATGCTATTGA CCAAACTGCC GATCAAAGTC TCTACTATTT ATCCAGGTTA TATCCGTACT GAAATCAATG AAAATGCTAA GCCTTTACCG TTTGAAGTGG ATGCAGATAC CGGCACCAAG GCAATTGTGG CAGCGATTGA AGCTGGCGTG GATGAAGCTT GTGTCCCAAG CTTACCCTGG TCAATTGTGG GTCAGGCAAT GAAGCATTTA CCATTACAAG TGGTTAATAA AGTAAGTTAG
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Protein sequence | MQNKLLSLIA KTATKSKSQL FSAIQPARYL KGLNKQQVGR GKTILITGAS SGLGEGMARL FAKLGYNLAI CARRMDRLES LQTELMAQYP DIRIEYRVLD VSDYDAIFEV FDAFAADFGH IDRVVVNAGI GESRRIGKGR FDTNRRTVEI NFISALAQCE AAMSIFREQG SGHLVVISSM SAMRGLPKHL TAYGASKAGL AHLAEGIRAD MLLTKLPIKV STIYPGYIRT EINENAKPLP FEVDADTGTK AIVAAIEAGV DEACVPSLPW SIVGQAMKHL PLQVVNKVS
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