| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1170 |
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| Symbol | paaH |
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| ID | 3514068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1398446 |
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| End bp | 1400014 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637669859 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_264455 |
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| Protein GI | 71065728 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.19667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA ACACATTGGC TATTATTGGC ACCGGCATTA TGGGTATGGG TATCGCCCAA
ATCGCCGCTC AAGCGGGCAT TCAAGTGCTC TTATTTGATG CTAAGGCAGG AGCCGCTGAG
CAAGGACGTC AATCTCTTCA AACCATGCTC GAAAAACTAG CAGCTAAAGG AAAATTTACG
GATGAGCAGT TACAGTCAAC TTTGACCAAT TTGACCGTGA TTGAAGATCT GACCCAAATT
GTGAAGGCTG AGCTCGTAAT CGAAGCAATC ATAGAAAATT TAGAGATAAA ACAACAGCTC
TTTAAACAGT TAGAAAGCAT TGTCTCTGCT GAGACGATTT TGGCAACTAA TACGTCATCG
CTAGCGGTGA CCACGATTGC CTCTGATTGC GCGCATCCAG AGCGCGTAGC AGGATTTCAC
TTTTTCAATC CAGTCCCACT AATGAAAATC GTTGAAGTTA TTCCGGGTAT CTCTACTAGA
GCTTCAGTGG TAGAGACGCT TAAGGAGTTA GCCAAGCGCA TGGGACATTT GGGTGTGGTG
GCGAAAGATA CACCAGGGTT TATTGTGAAT CATGGTGGTA GAGCTTATGG CACAGAGGCA
TTGAAAATAT TAGGAGAGGG GGTCGCTAGT TTTGAGGATA TCGATCGTAT CTTACGTGAG
GGTGCAGGCT TTCGAATGGG ACCATTTGAG CTGCTTGATC TTACAGGTAT CGATGTGTCG
CATCCAGTCA TGGAGTCAAT CTATAACCAG TTTTATCATG AAGATCGCTA TCGTCCCCAT
CCGTTAACTC GTCAGATGCT GATGGGGAAA AAGCTCGGTC GCAAAGTTGG TGAAGGCTTT
TATCAGTATA AAGATGGTCA AAAATTGACA GCAAATACGT CTAAATCATC ACTGTTTGAA
GCGTCATTTT CTAAAACAAG GTCTGATGCA GCCATTACCT CAGTTTGGAT TGGGGCGGAT
TTAGCAGAAG ATAAACAACA GCTGGTTGAT TATCTAAATT ATAAAGACGT CACTATTGAT
GATAACGATA AGCCAAACCC TGACAGTCTG GTATTGCTAG CAATCTATGG CGAGGATACC
ACCAACGCTG CTATTCGTTA TCAAGTGAAT CCTAAGCAAG CGGTCGCCAT TGATATGCTG
ACTGACTTAT CTAAGCATCG TACTTTGATG CCAAGTATCG TCACGCAAGA TAACTTTGTG
GCACAAGCTT ATGCTTTATT CGGTAAAAGC TCGGATGAGG GCTCAAATGT TGCTGTCGAT
GCTACGCTGA TTACTGAAAG CACTGGCTTT GTGGCGCAGC GAGTCATTGC GATGGTAATT
AATCTAGGGT GTGATATTGC AATGCAAGGT ATTGCCTCTT CTGAAGATAT AGATAATGCC
GTCAAGCTGG GATTAGGCTA TCCGTATGGT CCTATCTCAT GGGGCAACGA GCTTGGATCT
CAGCGAATTT TACTTATCTT AGAACGCATT TATGGCTTAA CCGGTGATCA ACGTTATCGT
CCAAGCCTGT GGTTACAACG CCGCGCCAAG CTAGGTATCT CACTGTTTAC TCAGCAGAGC
CATTATTGA
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| Protein sequence | MTVNTLAIIG TGIMGMGIAQ IAAQAGIQVL LFDAKAGAAE QGRQSLQTML EKLAAKGKFT
DEQLQSTLTN LTVIEDLTQI VKAELVIEAI IENLEIKQQL FKQLESIVSA ETILATNTSS
LAVTTIASDC AHPERVAGFH FFNPVPLMKI VEVIPGISTR ASVVETLKEL AKRMGHLGVV
AKDTPGFIVN HGGRAYGTEA LKILGEGVAS FEDIDRILRE GAGFRMGPFE LLDLTGIDVS
HPVMESIYNQ FYHEDRYRPH PLTRQMLMGK KLGRKVGEGF YQYKDGQKLT ANTSKSSLFE
ASFSKTRSDA AITSVWIGAD LAEDKQQLVD YLNYKDVTID DNDKPNPDSL VLLAIYGEDT
TNAAIRYQVN PKQAVAIDML TDLSKHRTLM PSIVTQDNFV AQAYALFGKS SDEGSNVAVD
ATLITESTGF VAQRVIAMVI NLGCDIAMQG IASSEDIDNA VKLGLGYPYG PISWGNELGS
QRILLILERI YGLTGDQRYR PSLWLQRRAK LGISLFTQQS HY
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