| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1110 |
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| Symbol | prpB |
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| ID | 3514808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1321787 |
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| End bp | 1322677 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669798 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_264395 |
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| Protein GI | 71065668 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.452189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCTAT CAGCTGGCGC TCGCTTTCGC AGTGCTCTAA CTCAAAAAAA CGATAATAAC
CAACCATTAC AGATTGCTGG CGCGATTAAC GCTTATACGG CGATGATGGC AACCCAAGTC
GGTCATCAAG CGTTATACCT CTCTGGTGCT GGCGTGGCCA ATGCTTCATT TGGTCTACCT
GATCTGGGCA TGACTAGCCT TGATAACGTC CTAGAAGATG CACGACGTAT CACTGATGCA
GTCGATACGC CATTATTGGT TGATATCGAT ACTGGCTTTG GCGGCGCGTT TAACATTGCC
CAAACCATTA GAAAAATGGA AAAAGCAGGT GTAGCAGCCG TACATATCGA AGACCAAGTC
GCGCAAAAGC GCTGTGGTCA TCGCCCAAAC AAAGAAATCG TTAGTATCTC AGAAATGGTT
GATCGCTTAA AAGCTGCGCT TGATGCCAAA GTGGATAGTA ATTTTGTGGT TATGGCGCGT
ACGGACGCTT TGTCTGTCGA AGGTCTTGAT GCGGCTGTTG AGCGTGCGGT TGCCTTTCAA
GAAGCGGGTG CTGATATGAT TTTTGCTGAA GCATTAACGG ACATTGAGAT GTATCGTAAG
TTCACCGATG TATTGAATAT CCCAGTACTG GCAAATATGA CCGAGTTTGG TCAGACCGAC
CTTTATACTA CTGAGCAGTT ATATGCGGTA GGTGTCGATA TGGTGCTATA CCCGCTATCT
GCATTCCGTG CGATGAATAA AGCGGCATTA AATGTCTATC AGCATCTGCT TGATGATGGT
ACACAGGACA AAGTCGTCGA TACCATGCAA ACCCGCATGG AGCTGTATGA TTTCTTAAAC
TATCATGAGT TTGAGCAGAC ACTTGATAAG CTGTTTGCTG ATAAAAAGTA G
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| Protein sequence | MTLSAGARFR SALTQKNDNN QPLQIAGAIN AYTAMMATQV GHQALYLSGA GVANASFGLP
DLGMTSLDNV LEDARRITDA VDTPLLVDID TGFGGAFNIA QTIRKMEKAG VAAVHIEDQV
AQKRCGHRPN KEIVSISEMV DRLKAALDAK VDSNFVVMAR TDALSVEGLD AAVERAVAFQ
EAGADMIFAE ALTDIEMYRK FTDVLNIPVL ANMTEFGQTD LYTTEQLYAV GVDMVLYPLS
AFRAMNKAAL NVYQHLLDDG TQDKVVDTMQ TRMELYDFLN YHEFEQTLDK LFADKK
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