Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1079 |
Symbol | |
ID | 3514965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1287431 |
End bp | 1288807 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637669768 |
Product | major facilitator superfamily multi-drug efflux pump |
Protein accession | YP_264365 |
Protein GI | 71065638 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0013428 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGCAC TGACTCCAAC GCAAGATAAA TACCTACCTT ATGTACTGGC GGTAGCGTTA TTTATGCAAA TTTTAGACGC TACTATTCTA AATACCTCCC TACCACAGAT GGCACAAGCA TTGGGCGAAT CACCACTACA AATGCAATGG GCGGTTATCA GCTACGCGCT TACTTTGGCG ATTTTTATTC CTATTAGCGG ATTTTTAGCC GATAAATATG GCACACGCCG CGTGTTCTTG TCCGCCATTA TCATATTTTG TATCGGCTCG CTATTGTGTG CCGCTTCTCC GACCTTGGAT TTTTTGATCA GTTCACGTAT CGTACAAGGT ATCGGCGGCG CGATGATGAC ACCGGTTGCA CGCTTGATAT TGGTCAAGTC TTATCCGCGC AATAAGCTAT TAACGGTGAT GAACTTTGCG GTCATCCCTG CTTTGGTTGC ACCATTGGTC GGACCAGTAT TGGGTGGTTA TATCGTACAG TACACCAGCT GGCACTGGAT ATTTTTAATC AATATCCCGA TGGGTATTTT TGGTTTTATC ATGGGCAAAA AACTGGTGCC AGCATTGTTT GAGGACTCCA AGCGTCTAGA TTGGACAGGG TTTTTATTGT TTGCCGCTGC TGCGTGTGGT TTTACTCTGG CAGTAGAATT TGGCACACAA GTCGGGCGTG AATTTTATGG AATGATGCTT GGATTGCTGG CAAGTCTATT GCTCGGCGCT TATATTTGGC ACGCAAAACG CCGCGCAACA CCGCTATTTC CATTGAGTTT GTTTGATATA CGTACCTTTC GTATCGGCAT CACAGGCAAT TTATTTACCC GATTGGGCAT TAGCGCTGTA CCATTTTTAC TTCCACTACT GCTGCAGGTG GTGTTCGAGT ACTCTCCATC GCAAGCGGGC TGGCTACTCG CTCCTATTGC TGTAGGGGCT ATCGGCATCA AGCCTTGGGT GAGTAACATT ATTCAGCGTT ATAGCTATCG GACGGTATTA GTCTACAACA CGACTTTGAT AGGCATACTG ATTATCATCT TGGCGCAGTT TAATGATGCG GCACAGTGGA TGTGGTTTAT CCCTATTTTG ACAGTGATGG GCGCGTGTAA CTCTATGCAG TTCAGTGCGA TGAACACCAT CACCATTGGC GACCTGCACG GCGCACAAAC CAGTAGCGGC AATAGTTTGA TGGCCGTCAA CCAACAATTG GCAATCAGCT TTGGCATTGC CTTTGGTGCT GCACTGCTCA ATCTACTACG TGAGCGCCTA CAGATGGATA CATTGACCGC CTTTCAAACC ACCTATTGGA TATTGGGTCT GTTTACCATT CTCTCAGGAT TGCATTTCTT ACGCTTAAAA CCCGAGGATG GTCGCGGCTT ATATTGA
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Protein sequence | MVALTPTQDK YLPYVLAVAL FMQILDATIL NTSLPQMAQA LGESPLQMQW AVISYALTLA IFIPISGFLA DKYGTRRVFL SAIIIFCIGS LLCAASPTLD FLISSRIVQG IGGAMMTPVA RLILVKSYPR NKLLTVMNFA VIPALVAPLV GPVLGGYIVQ YTSWHWIFLI NIPMGIFGFI MGKKLVPALF EDSKRLDWTG FLLFAAAACG FTLAVEFGTQ VGREFYGMML GLLASLLLGA YIWHAKRRAT PLFPLSLFDI RTFRIGITGN LFTRLGISAV PFLLPLLLQV VFEYSPSQAG WLLAPIAVGA IGIKPWVSNI IQRYSYRTVL VYNTTLIGIL IIILAQFNDA AQWMWFIPIL TVMGACNSMQ FSAMNTITIG DLHGAQTSSG NSLMAVNQQL AISFGIAFGA ALLNLLRERL QMDTLTAFQT TYWILGLFTI LSGLHFLRLK PEDGRGLY
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