Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1062 |
Symbol | gdhA2 |
ID | 3514948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1262062 |
End bp | 1266921 |
Gene Length | 4860 bp |
Protein Length | 1619 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669751 |
Product | glutamate dehydrogenase (NAD) |
Protein accession | YP_264348 |
Protein GI | 71065621 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACT CTCTAAATAT CGCAAAAGAG CGGATCAGCC AGATAAGCGA TATTGCCACC AGTTATGTAC AAGCGGACAA ATCATTATTT GACCACTTTA TCCATAGCTA CTATCAGCCA CTACATCAAG AGACTGCAAA GGACATCAGT AATGCTGATT TAGCAGGGAT GGCGCTGCAT CATTTTACGC TACTAAAAGC CTATGACCGC AGCCAGCCGC AGCTTGCTAT TTTAAATCCC ATTGCAGAAG AGCAGCATTT TCATAGCTCA CATACCGTTA TCCAAATCGT TGCCTATGAC AGACCATTTT TGGTCGACAC ACTGTTGATG AGTCTTGAAG AGCAAGGCAT CGATGTGCAT CGTACTTATC ATATCATCGT CAATGTCGAA CGCGATGAAA ATGGGGCGAT CACTAAAGTT GAAAGCGCCC AAGAAAGTGG TACTTCACAC ATGTCTTTGA TTCACTGTGA AATCTCTTAT CAAGACAATG ATGAATTGGC AGCATTAAAA CAGATGCTGT TGGCAAAAGT AGACACACTT GATGTTGTCG TTGATGACTG GCAGCAGATA CGCGCCAAGC TAACCGATAT AAAAGCAGAC CTTGCTACAA AAACACTGCC GGAAGTATTT TATTCTCAGC AAGAGATTCA AGCATTTTTA GATTGGGTAC TAGACGACCA CTTTATCTTT TTGGGATATC GAGAGTACCG CTTAGAAGAC GGGCACAGCG TCGAGGTTGA TAGTGTTGGC AACACAGCCA ATCAAGCCGA CCGCAGTGAT TTAGATTTAT TTTCTATTGG TAACAGTGGG CTTGGGTTAT TACGCGGTGG TAGTGAGGAT CAGCTTTCAA AAAGCTTTGA CGAGCTGCCA AGCAATCTAA AAAGACTGCT AACAGCGCCG CAAGTGCTGG TCTTGTCAAA ATCAAGCCGA GTATCGCCCG TACACCGACC AGTCTATATG GATTTTTTGG GCATTCATAA ATTTGACGAT AATGGCAAGC TCGTCGGTGA GCATCGCTTT ATTGGTCTCT TTACAGCGCA AGCTTATCAG CTAAGCGTAC AACAAATTCC ATTATTACGA GAAAAATCTA ACAAAATCAT GGCGATGGCA AAACTACCAC GTGATGGTCA TGCGTATCAT AAAATGATGC ATATCATTAA TACCTTGCCG CGCGATGATT TATTTCAAGC CAGCATTGAA GATCTTTACC CGACAGTTCT AGGAATCAGT CAGCTACAGG ACAAAAAAAG CCTGCGCTTA TTTTGCCGTA TCGATCATTA CCAGCGTTTT GTTTCCTGCT TGGTCTATAT TCCGCGTGAT AAATTCAATA CAGAACTTCG CATCAAGGTC CAAAATGTCC TAAAAGAAGC CTATGGTGGC ACATCTTCAG GCTTTACGAC GGAGTTTAAT GAATCTGAAC ATGCCCGCGT CCATGTGCAT GTCCGTACAG TGCCAGGTCA AGTACATGAG GTGGATACTG CTGCGCTCCA AGCCAAGCTG TCCTCTTTGA TGCAGTCGTG GAGTGATAAT TATCAAAAAA TGCTGCTGGA TAACGTGGGT GAGCAGCATG CCAATGCCTT GACGCGTAGA TTTTTAAGTT ATATACCTGC CGCTTACCAA GAGCGATTCG ATGCACGTAC TGCCGTTGAA GATACCAAGC GTTTGGCTGG ATTGAGCGAT GAGCAGCCGA TGATTTGGCA CTTATATCAA TCGACAGGTG ATGCAAGCAA TCAGTTGCAT TTAAAGCTAT ATGGTCGCCA AAAAGCGGTT ATTTTATCCA AAGTCTTACC CGTACTAGAG AATTTTGGGG TGTCAGTTAT CTCAGCGCAG ACCTATGAGT TTGATCTACC TGAGCAACCT ATTTGGATGC AGGAGTATGA GCTGATTTTA GAGCACGTCG ATACCATTGA TATGCAAGTG GTGCGCGCGC AGTTTGAAGA CAGCTTACAG CAAATTTGGG CAGGACAGGT TGAGAGTGAT TCACTTAACG AGTTGGTATT GACCACCAAG TTAGATACTT ATGATGTGGT GGTACTGCGT GCCTTATCAC GCTATATGAT GCAGGCGAAA GCACCGTTCT CAAATGTTTA TATCCAACAA ACCATCGTAA AAAACAGCGC TATCAGCGTG GCATTAGGCA GTTTGTTTGA TGCACGGATG AATCCTAAAT ATAGTGAAGA GGAACGAGCC AGCAAAACCA GCCAGATTCA AGAGCAGATC ACCGCCGCAT TAGCAGGTGT CAGTAGCTTG GATGAAGATC GTATCTTCCG CTGGTACTTG GATTTAATTA ACGCCATGGT ACGAACCAAT TTTTATCAAA GAGAGGCGGA TGGACAACGT AAAGATCGTT TGTCCTTTAA ATTTTTGGCA GCAGATATAC CAAACCTGCC AAAACCTAAG CCGATGTTTG AGATCTTTGT CTATTCGCCA CGCGTTGAAG CAGTGCATTT GCGTGGCGGT AAAGTCGCGC GCGGCGGGCT GCGCTGGTCT GATCGTATGG AAGATTTCCG TACCGAAGTA CTCGGTTTGG TTAAAGCACA AATGGTCAAA AATGCCGTTA TCGTACCGGT TGGTTCAAAA GGCGGTTTTA TCGTTAAGAC TAAAACGATG GCGGATGGTC GTGATGTGTT CCAAGCTGAG GGCATTGCCT GCTACCAAAC ATTCCTTCGC GGTATGCTTG ATGTGACCGA CAATATCGTC GATGGGGTGA TTGTCCCGCC AGCCAATACC GTACGTCATG ATGAAGATGA TCCGTATTTG GTGGTCGCTG CCGATAAAGG TACGGCAACC TTTTCTGACA TTGCCAATGC TTTGTCTACT GAATATAACT TTTGGCTAGA TGATGCCTTT GCTTCTGGTG GCTCGGTCGG TTATGACCAC AAAGCGATGG GCATCACCGC CCGCGGTGGT TGGGAGTCGG TTAAGCGCCA CTTCCGTATG CGCGGCATGG ACATTCAAAA TCGTGATGAT TTTACCGTCG TTGCTATTGG CGATATGAGT GGTGACGTCT TTGGTAACGG TATGCTTAGA TCAACCCATA CTAAACTGGT GGCTGCCTTT AACCATCTGC ATATTTTTAT TGATCCCAAT CCAGATACAG CGGCGTCTTT TGCAGAGCGT GAGCGCTTAT TTGATCTACC TCGCTCATCA TGGGAGGACT ATGAAAAGTC ACTCATTAGC CAAGGCGGTG GTATCTTCTC ACGCCAAGAC AAGACTATTG CTATCAGCCC TGAGATGAAA GTACTGTTCG ATATCTCAGA TGACAGCTTA GCACCTAATG ATTTTATCAG CGCATTGCTA AAATCGCCAG TAGATCTCAT TTGGAATGGT GGTATCGGTA CCTATGTGAA AAGCAGTGAG GAGAGCCATG ACGATGTAGG TGATCGTGCC AATGATGCCG TACGTGTCAA CGGTGGCGAA TTACGTGCGA CTATCGTCGG TGAAGGTGGT AACCTAGGGT TCACGCAGCG AGGTCGTATC GAGTATGCCC AAACTGGTGG GCGCATTTAT ACCGATGCGA TCGATAACTC AGGCGGCGTT AACTGCTCAG ATCATGAAGT CAATATCAAA ATCTTACTTG GCAAAGTGGT TGAGCAAGGT GATATGACGT TGAAGCAGCG TAATGAGCTT CTTGAGAGCA TGACCGAGAC CATTAGCGAA TTGGTGCTGC GTCAAAACTA TCTGCAACCG CAAGCAATTG AGCTGAGCCA AATACTTGCA GCTGCAAACT TAAGTGATCA TCAGCGATTT ATTCAGATGT TAGAAGCAGA AGGGCGTCTG GATCGTGCAA TTGAGTATTT GCCATTAGAT GAAGAGATTA CCAAACGCCA AAAAGCGGGT ACAGGTCTGA CTAATCCTGA GCTAGCAGTT GTGATGGCTT ACGGAAAAAT GTGGGTTTAT GATAACTTAC TGCTCTCAGA TTTACCGGAT GCGCCATATT TTGTTAATGA ATTACGTAAA TACTTCCCTG ATGAGCTGTC ATCGCGCTTC TTTGATGAGA TGACCGAGCA CCGTTTGCAC CGTGAAATCA TCAGTACGTA TCTGACCAAT AGTGTGGTCA ACCGTCTGGG TATCGAAGCA TTATTCCGTC TGCATGAAGA AACAGGACAA ACGCTTGCCA CTATCGTGCG TGGCTATGCC ATTGCGCGTG ATGTATTCCA TGTCTCAAAA GCATGGGAGC TGCTAGAAGC ACTTGATAAT CAAGTGGATG CCATCTTGCT GCTCGAGCTT GAACTACGTT TGCGCGATGC ACTCGAAAAC GGCGTGGTCT GGTTTATCAA TGCCTTTGGA CAAGATTTGC AAGTGGCCGA TATGATTAGC CGTTTTGAAG ATAGTGTTGA AAAGCTAACC AAATCAGGCG GATTTATTGA GCAGCAATTC TCACAATACT TGCAAGCCGA TACCACAAGC TTGATAGAAG ATGGTCTCTC CGCCAATGAT GCATCAATGT TTGCGATGTT GCCATACCAT GTTGATGCGC TTGATGCTGC ACTCTTAGCA GAGCAGTACG AACGTCCGGT TGATGAGATT GCCACTTTAT ACTTTGAGGC TTATCACGTT TTGCAGCTTG ATTGGATGAT GGATAATATC GCCACGTTAC CGCAGCAGGA TCACTGGGAT CGCCGTGCCC GTCACGCACT TGCCAATGAA GTATCGCGCA GCTTACGCAT GCTGATGGAT ACGTTATTGA CTCAGCCTGA TGCGATCCAA GCATTCAATG ATTGGAAATC GCGGTATGCC AGCCAGCTTG CCGGCATCAC TGCTGAGATG GACAAACTTG ATAGCAATGA TGATAGTCAT ATCAGCTTAT CAACGTTATC AGTCTTGATG AGTGAGTTAA GTGGTTTAGT GAATAAATAA
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Protein sequence | MPNSLNIAKE RISQISDIAT SYVQADKSLF DHFIHSYYQP LHQETAKDIS NADLAGMALH HFTLLKAYDR SQPQLAILNP IAEEQHFHSS HTVIQIVAYD RPFLVDTLLM SLEEQGIDVH RTYHIIVNVE RDENGAITKV ESAQESGTSH MSLIHCEISY QDNDELAALK QMLLAKVDTL DVVVDDWQQI RAKLTDIKAD LATKTLPEVF YSQQEIQAFL DWVLDDHFIF LGYREYRLED GHSVEVDSVG NTANQADRSD LDLFSIGNSG LGLLRGGSED QLSKSFDELP SNLKRLLTAP QVLVLSKSSR VSPVHRPVYM DFLGIHKFDD NGKLVGEHRF IGLFTAQAYQ LSVQQIPLLR EKSNKIMAMA KLPRDGHAYH KMMHIINTLP RDDLFQASIE DLYPTVLGIS QLQDKKSLRL FCRIDHYQRF VSCLVYIPRD KFNTELRIKV QNVLKEAYGG TSSGFTTEFN ESEHARVHVH VRTVPGQVHE VDTAALQAKL SSLMQSWSDN YQKMLLDNVG EQHANALTRR FLSYIPAAYQ ERFDARTAVE DTKRLAGLSD EQPMIWHLYQ STGDASNQLH LKLYGRQKAV ILSKVLPVLE NFGVSVISAQ TYEFDLPEQP IWMQEYELIL EHVDTIDMQV VRAQFEDSLQ QIWAGQVESD SLNELVLTTK LDTYDVVVLR ALSRYMMQAK APFSNVYIQQ TIVKNSAISV ALGSLFDARM NPKYSEEERA SKTSQIQEQI TAALAGVSSL DEDRIFRWYL DLINAMVRTN FYQREADGQR KDRLSFKFLA ADIPNLPKPK PMFEIFVYSP RVEAVHLRGG KVARGGLRWS DRMEDFRTEV LGLVKAQMVK NAVIVPVGSK GGFIVKTKTM ADGRDVFQAE GIACYQTFLR GMLDVTDNIV DGVIVPPANT VRHDEDDPYL VVAADKGTAT FSDIANALST EYNFWLDDAF ASGGSVGYDH KAMGITARGG WESVKRHFRM RGMDIQNRDD FTVVAIGDMS GDVFGNGMLR STHTKLVAAF NHLHIFIDPN PDTAASFAER ERLFDLPRSS WEDYEKSLIS QGGGIFSRQD KTIAISPEMK VLFDISDDSL APNDFISALL KSPVDLIWNG GIGTYVKSSE ESHDDVGDRA NDAVRVNGGE LRATIVGEGG NLGFTQRGRI EYAQTGGRIY TDAIDNSGGV NCSDHEVNIK ILLGKVVEQG DMTLKQRNEL LESMTETISE LVLRQNYLQP QAIELSQILA AANLSDHQRF IQMLEAEGRL DRAIEYLPLD EEITKRQKAG TGLTNPELAV VMAYGKMWVY DNLLLSDLPD APYFVNELRK YFPDELSSRF FDEMTEHRLH REIISTYLTN SVVNRLGIEA LFRLHEETGQ TLATIVRGYA IARDVFHVSK AWELLEALDN QVDAILLLEL ELRLRDALEN GVVWFINAFG QDLQVADMIS RFEDSVEKLT KSGGFIEQQF SQYLQADTTS LIEDGLSAND ASMFAMLPYH VDALDAALLA EQYERPVDEI ATLYFEAYHV LQLDWMMDNI ATLPQQDHWD RRARHALANE VSRSLRMLMD TLLTQPDAIQ AFNDWKSRYA SQLAGITAEM DKLDSNDDSH ISLSTLSVLM SELSGLVNK
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