Gene Psyc_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0926 
Symbol 
ID3515166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1108392 
End bp1109189 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content42% 
IMG OID637669615 
Productputative ABC transporter, ATPase subunit 
Protein accessionYP_264213 
Protein GI71065486 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.617438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA ATAAAAATAA TGCCACTTTA GCAGCAAACC AAACAATAAC AGTGAATGAT 
GGTGTTGAGC CGGTTGCTCG TTTATCGATG CAAAACTTAG GTAAGCGCTA CGGTAAGCGC
TGGGTGGTTA AAGATGTCTC ATTTTCCGTT GAGCAAGGGC AAGTCGTTGG ATTGTTAGGT
CCAAATGGTG CAGGTAAGAC GACCAGTTTT TATATGGTGG TCGGACTGGT TAATATGGAT
AAAGGCCGTG TAACCTTGGG GAAAATGGAC TTATCTAAAT ATGCCATGCA TGAGCGTGCG
CGTGCCGGTA TTGGTTATTT ACCGCAAGAA GCGTCTATTT TTCGTAAACT GTCGATTGAG
GACAATATTT TAGCGATTCT GCAAACTCGT AAAGATTTGA ATGGTAGCCA ACAGCGTCAA
GAGCTTGAAA AACTTATTGG TGATTTTCAT TTAGAGCATG TACGAAAATC TCTAGGCATG
AGCGTATCAG GCGGTGAGCG TCGTCGTTGT GAGATTGCTC GCGCTTTAGC AGCTGATCCC
AAATTTATCT TATTAGATGA GCCTTTTGCC GGTGTAGATC CTATCTCTGT CGGCGATATT
AAAGAGGTTA TCTTAGCACT GAAAAAGCGC GGTATTGGCG TGTTAATCAC TGACCATAAT
GTCCGTGAAA CTTTAGCGAT TTGTGAAAAA GCCTATATTG TCTCAGAGGG CGCTATCATT
GCTGAGGGTA CCTCAGAAGA AATTCTAGAA AATGAGCTGG TGAAATCTGT GTATCTTGGT
AAAGACTTTC AGGTATAG
 
Protein sequence
MNDNKNNATL AANQTITVND GVEPVARLSM QNLGKRYGKR WVVKDVSFSV EQGQVVGLLG 
PNGAGKTTSF YMVVGLVNMD KGRVTLGKMD LSKYAMHERA RAGIGYLPQE ASIFRKLSIE
DNILAILQTR KDLNGSQQRQ ELEKLIGDFH LEHVRKSLGM SVSGGERRRC EIARALAADP
KFILLDEPFA GVDPISVGDI KEVILALKKR GIGVLITDHN VRETLAICEK AYIVSEGAII
AEGTSEEILE NELVKSVYLG KDFQV