Gene Psyc_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0908 
Symbol 
ID3515148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1087658 
End bp1088176 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content50% 
IMG OID637669597 
ProductOmpA/MotB family outer membrane protein 
Protein accessionYP_264195 
Protein GI71065468 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.975322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.906995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCA GTTTTTCAAA AATCGCTGCC CTCGCTGTAT TATCAAGCGC CGTTGTTCTA 
GCCTCAGGTT GTGCTACCAA GCGCGCTATT TCTGAAGTGG TCGTGGCTCC ACTAGGTATC
CCAGGTGGTC AAGTTGGCTA CACTGGTGCG GTCATCGTTG ACAACTCAAA CGCAGTCATC
AGCGGTGCTG AAAACATCCA AGCCGTTGTA TACTTTGCCT TTGACAGCAG TGAGATCACT
TCACAATCTG CGGGCGTCTT AAACCAACAT GCAGATCTGT TAAAATCTAA CCCATCAGCG
GGTGTGGTTA TTGCTGGTCA TACCGATGAG CGCGGTAGTC GTGAATATAA CATCGCATTG
GGTGAGCGCC GTGCCCAAGC AGCACGTGAT TATCTTGCTG CTCAAGGCGT TGCAGCAAAT
AACATCCGTG TCATCAGCTA TGGCGAAGAG CGTCCTGCTG CTGCCGGTAC GAACGAAGAT
GCTTATGCCC AAAACCGCCG TGCTGAACTG TCTTACTAA
 
Protein sequence
MSTSFSKIAA LAVLSSAVVL ASGCATKRAI SEVVVAPLGI PGGQVGYTGA VIVDNSNAVI 
SGAENIQAVV YFAFDSSEIT SQSAGVLNQH ADLLKSNPSA GVVIAGHTDE RGSREYNIAL
GERRAQAARD YLAAQGVAAN NIRVISYGEE RPAAAGTNED AYAQNRRAEL SY