| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0878 |
|---|
| Symbol | |
|---|
| ID | 3514878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1045806 |
|---|
| End bp | 1047080 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637669566 |
|---|
| Product | type I restriction modification system methylase |
|---|
| Protein accession | YP_264165 |
|---|
| Protein GI | 71065438 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.707045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGTG ATTGGAATGA GGACATTTTA TCTAATATCG CTGAAATAAT TGACTCTAGA
CATAAAACTC CTGTTTATTC TGACTCAGGC TATCCTATGG TTCGAGTTGT GGATGTTAAC
GGTGGTGCTC TAAACCTAGA AAGTACAAAA AAAGTTTCTG ATGATATATA TGAGGATTTC
TCTAGAGGAA GAGATCCACA GATTGGAGAT TTAGTAATTT CTCGTGTTGG AAGCTATGGT
GTTGTCTCCT ATGTGAACTC AAATGAAAAG TTTTGTTTAG GTCAAAATAC TGCATTTATA
ATTCCTAAAA TAAACAGTCG ATTTTTATAC TATCAACTTA TTTCACCTTT TGTTAAATGG
CAAATAGAGC AATTTGTTGT TGGAGCTGTA CAAAAGACAA TTAGCTTGAA AAGTATTCGC
CAGTTCCAAA TAAAACTACC TCCAGTAACA GAACAAAAAG CCATTGCCCA TATTCTCGGT
TCTTTAGATG ACAAAATCGA GCTAAACCGC CAAATGAACG AGACGCTAGA AGCGATGGCG
CAGGCGTTAT TTAAGAGCTG GTTTGTGGAT TTTGATCCAG TGATTGATAA TGCGCTTGCG
GCTGGTAATG CTATTCCTGA TGAATTTATC GAACGTGCCG AGCAGCGTAA AAAAATTGAG
AGAAAAGAGA GCTCGGATAT TCAGGGTTTA TTCCCTGATG AATTTGAGTT TACGGAAGAG
ATGGGTTGGA TTCCGAAGGG GTGGAACAGT GGCACGCTAG GGGATTTTGC AATATTAGGA
AATGGTAAAA CATCACCTGA TAGAGCCGTT GGTGATATTC CAGTGTTTGG CTCGAATGGA
AAGATTGGTG ACTGTGATGA GTCAAATAGA GACAATACTA TAATAATCGG CAGAGTCGGT
AGTTACTGCG GTAGTTTGCA GTACTATCCT TTCAAATGTT GGATAACTGA TAATGCAATG
TCAGCGGAAA TGAAAAATAA AGATCATAAT ATTTATCTGT TTCAACTTCT CTCAAGAGAT
AATTTGAATG ACCGAAGAAC GGGTAGTGGG CAACCATTAC TTAATCAAAG TATTTTACGT
TCTATTAAGA CTATTACGCC CTCTGTACCT TTAATAGATG AGTATTCAAG AATAGCAAAT
AGCTTTTATA AAAAAATTAA TAAGGCTAAT AGAAATAATG CAGCCCTCGC CAAACTCCGT
GACACCCTTT TACCTAAATT AATGTCAGGT GAGCTACGCA TTGCAGATGC TGCGGCGATG
GTCGAGGACG TATAA
|
|---|
| Protein sequence | MVSDWNEDIL SNIAEIIDSR HKTPVYSDSG YPMVRVVDVN GGALNLESTK KVSDDIYEDF
SRGRDPQIGD LVISRVGSYG VVSYVNSNEK FCLGQNTAFI IPKINSRFLY YQLISPFVKW
QIEQFVVGAV QKTISLKSIR QFQIKLPPVT EQKAIAHILG SLDDKIELNR QMNETLEAMA
QALFKSWFVD FDPVIDNALA AGNAIPDEFI ERAEQRKKIE RKESSDIQGL FPDEFEFTEE
MGWIPKGWNS GTLGDFAILG NGKTSPDRAV GDIPVFGSNG KIGDCDESNR DNTIIIGRVG
SYCGSLQYYP FKCWITDNAM SAEMKNKDHN IYLFQLLSRD NLNDRRTGSG QPLLNQSILR
SIKTITPSVP LIDEYSRIAN SFYKKINKAN RNNAALAKLR DTLLPKLMSG ELRIADAAAM
VEDV
|
|---|
| |