Gene Psyc_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0830 
Symbol 
ID3514330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp996897 
End bp997739 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content47% 
IMG OID637669517 
Productputative electron transport complex, RnfABCDGE type, B subunit 
Protein accessionYP_264117 
Protein GI71065390 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.214006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCA CCACTAGTAA AAATAGTAGT CACATCCGTC TAACCAATCT ACCAATCTTG 
TTCGATACTT TGGATATAGA GCGCTTACCT GCTGATATTC AGGAAAAGAT CACGCGCATT
GATGCCAGCC TACCGCAAAC GCAGTGTGGT CTTTGCGATC ATGCAGATGG CTGCCTACCC
TATGCAGTCG CTATCGCGCT AGATAATGAG CCACATAATA AATGTGTGCC GGGTGGTCAG
CCAGTGACTG ATACTATTGC GCAGATTATC AATGCTGATA TAACCACACT AAGCGCTGAG
TCTTCAAAAT GGCCACTAGA TAGCCATTCT CAGCGTCCTG TTGAAGTGCG CGCCGTCATT
CGTGAAGATG ATTGCATTGG CTGTACCAAA TGTATTCCTG CTTGTCCAGT TGATGCCATC
GTTGGTACTG GTAAGCACAT GCATACTATT TTCACCGACT TGTGTACAGG CTGTGAGCTT
TGTATCGCGC CCTGTCCTGT TGATTGCATC GATTTGGTCA CGGTTGAGCT CACGCTTTCG
ATGCCTGAGC GCACGCTTGA GCAGGATGAT TTAAGGCAGC GCTACCATAC CCATTTAAAT
CGTGTCAGCG AACAACTTGC GGATAGCAGC AATAGCAGAC CCGTGGTCAG CATGGTAGAA
GCAAAGCTCA ACAATGCCAC CAGTCTGTCT TTAAACATCA GTGAAGAACA AGCTAAAAAC
ACCATTGCCG CTGCCAAGCT GCGTACTAAA ATTAAAAAGC TGGAAAAGCA GCTTAGCGTG
CGAGCAAATG ACAGTAAACA AGCAGAGCTT ACTGCATTGC AAACAGAGCT TTCACACCTT
TAA
 
Protein sequence
MHSTTSKNSS HIRLTNLPIL FDTLDIERLP ADIQEKITRI DASLPQTQCG LCDHADGCLP 
YAVAIALDNE PHNKCVPGGQ PVTDTIAQII NADITTLSAE SSKWPLDSHS QRPVEVRAVI
REDDCIGCTK CIPACPVDAI VGTGKHMHTI FTDLCTGCEL CIAPCPVDCI DLVTVELTLS
MPERTLEQDD LRQRYHTHLN RVSEQLADSS NSRPVVSMVE AKLNNATSLS LNISEEQAKN
TIAAAKLRTK IKKLEKQLSV RANDSKQAEL TALQTELSHL