| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0826 |
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| Symbol | |
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| ID | 3514326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 992104 |
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| End bp | 993756 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637669513 |
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| Product | BCCT family choline/carnitine/betaine transporter |
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| Protein accession | YP_264113 |
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| Protein GI | 71065386 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0130314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATG TAAAAGTTGG CAGGTTAGGC CCTTTTCCAC GGGTAAGCAA ACCTGTGTTT
ATTACTTCAG CGTTACTTAT CGTTGGATTT ATCATCTTTG GCACTTTTTT CACTGAAACC
GCTGGCGCGC TATTTAGTTT TTTACAAAAT TTTATCACGG ATAAGTTCGG CTGGATGTTT
ATTATATTAA TGAACGTGGC GCTGGTCTTT TGTATTTATC TAGCGGCGAG CCGTTACGGT
GATATTCGTT TGGGTCAACA AACAGAGAAG CCGCAGTACA GTCTTTTTTC GTGGATCGGC
ATGTTGTTCT CTGCTGGTAT CGGTATTGGA CTGGTGTATT GGGGAACGGC TGAGCCCCTA
TACCACTTTA TGGCACCACC ACTAGGTGAA GCTGAAACAG TAGAAGCTGC CAAGCAGGCT
ATGAGCATCT CATTTTTGCA TTGGGGATTA CATGCTTGGG CGATTTATAC CATAGTGGCA
TTGGCACTGG CTTATTTCCA CTTTCGCCGT GGACTGCCGT TATCGATTCG CTCGACGTTA
TATCCGCTAT TAGGCGAAAA AATATATGGC CGCTGGGGTC ATGCGGTTGA CATCCTAGCC
GTATTCGGGA CGATGTTTGG TGTGGTAACT TCCTTAGGTC TAGGAGTTAT GCAAATCAAT
TCAGGTCTTG AAAATTTATT TGGTATACCA AATTCTTTAA CGGTACAGTT TATTATTATT
GCCTTTGTGA CTGCATTGGC CTGTGGCTCG TTGATGCTTG GGCTTGATAA AGGTATCAAG
CGCTTGAGTG ATATCAATAT GGGTTTTACA GGTGTGCTCT TGGCCTTTAT GGTTATTTTA
GGGCCAACCT TATTCATTTT TGATAGTTTT ATAGAAAACA TCGGTAATTA CATAGTCGCT
ATGGTGCCCT TATCAACATG GGGAGAAGCT TATGGTAATA CAGACTGGCA GAGTGGTTGG
ACGATTTTCT ATTGGGCATG GTGGGTAAGT TGGGCACCAT TTGTAGGGGT ATTTATTGCG
CGTATCTCTC GTGGTCGTAC CATCCGTGAG TTTGTATTGG GCGTGCTGTT GATTCCAATG
TTGATTTTGT TTTTCTGGTT CACCACTTTC GGTGGTGTCG CTATTCATAT GGAACTTTTA
GCTGCTCTTG ATCCGGCTAT AGCCAGTCCG GGATTGGTAG AAGCAGTACA GGCAGATACG
GGTAGTGCTA TTTTTAAACT GGTTGAGTAC TATCCATTCG CGAAACCAAT TACTTTTCTT
GTCGTTATTA TGATTGTCTT ATGGTTCGTG ACCTCATCGG ATTCAGCCAG TTTTGTTATC
GACATGCTGA CGGCTGGTGG CGATATCAAT CCACCCAAAA TCCAACGCTT ATTTTGGGCG
TTGATGGAAG GTTTGATTGC AGCTATATTG TTAGCAGCAG GCGGACTGGG CGCATTGCAA
GCAGCCGCTA TTGTAGCTGG ACTGCCATTT GCTTTGGTTA TATTTGTCAT GATGTATGCG
TTACTTCGGG GCTTAAGTCG AGATCGATTG ATACTGTATC GAGCTCAACA GCACTTTATT
ACCGAAGAGT CGGCAGATCA TAACTCAGCC AATGAGTTTG CTGATGAGCA CTTGCTCACA
GATCCCTCTG CTATTGAAAA GCCTGAAGGT TAA
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| Protein sequence | MNHVKVGRLG PFPRVSKPVF ITSALLIVGF IIFGTFFTET AGALFSFLQN FITDKFGWMF
IILMNVALVF CIYLAASRYG DIRLGQQTEK PQYSLFSWIG MLFSAGIGIG LVYWGTAEPL
YHFMAPPLGE AETVEAAKQA MSISFLHWGL HAWAIYTIVA LALAYFHFRR GLPLSIRSTL
YPLLGEKIYG RWGHAVDILA VFGTMFGVVT SLGLGVMQIN SGLENLFGIP NSLTVQFIII
AFVTALACGS LMLGLDKGIK RLSDINMGFT GVLLAFMVIL GPTLFIFDSF IENIGNYIVA
MVPLSTWGEA YGNTDWQSGW TIFYWAWWVS WAPFVGVFIA RISRGRTIRE FVLGVLLIPM
LILFFWFTTF GGVAIHMELL AALDPAIASP GLVEAVQADT GSAIFKLVEY YPFAKPITFL
VVIMIVLWFV TSSDSASFVI DMLTAGGDIN PPKIQRLFWA LMEGLIAAIL LAAGGLGALQ
AAAIVAGLPF ALVIFVMMYA LLRGLSRDRL ILYRAQQHFI TEESADHNSA NEFADEHLLT
DPSAIEKPEG
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