| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0815 |
|---|
| Symbol | carA |
|---|
| ID | 3514663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 979715 |
|---|
| End bp | 980947 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637669502 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_264102 |
|---|
| Protein GI | 71065375 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0593166 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATTCAT CGACAGAAAT ACAAGCAATT TTGGCACTAG CGGACGGTAC GATTTTTCGT
GGTATTAGTA TCGGCAGCCT TGGTCATCGT GTCGGTGAGG TGGTTTTCAA TACAGCCATG
ACAGGGTATC AAGAAATCCT AACCGACCCA AGCTACGCGC GTCAGCTCGT GACCCTCACC
TACCCGCATA TCGGTAATAC CGGTACCAAC GCTGAAGATG TCGAGTCTGG CAATGGCCAT
AAAGTGTGGG CTGACGGTCT TATCATTCGT GATGCGACCA TGGTGACCTC AAACTTCCGT
CATTCAGAAT CACTGAGCGA TTATCTACAA AATCATAACA CCGTCGCCAT CGCTGATATT
GATACGCGCC AATTGACTCG CCTGTTACGT GATAAAGGCG CACAAAATGG ATGTATCATG
ACCGCCTCTA ATGGCGAGAC TATCAGTAGT GATGACGAGC AACAAGCCAT TAAACTGGCG
CAAGAGTTTG CTGGTATTGA AGGTATGGAC TTGGCAAAAG AATGCTGTAC GCCAACCACG
TTTGAATGGA CAGCCGGTAG CTGGGATTTA TCCGATACTC TACTTAATCG CGATATAGCT
GGTAGCCATG ATAGTGGTAC GGGCGGCTTC TTTAAGCATT TGGGCACGCA TATTGAAGCA
AAATACAATG TCGTTGCTTA TGACTTCGGT AGCAAAACCA ATATCCTACG TATGCTAGTA
GACCGCGGCT GTCATGTAAC CGTCGTGCCA GCGCAAACGC CTATCGCAGA TGTGCTAGCG
ATGAATCCAG ACGGTATATT CTTATCAAAT GGTCCTGGCG ACCCTGCTGC TTGTGATTAC
GCTATCGATG CGGTACGTCA TATCATTGAA GAGACAAATA TTCCGACCTT TGGTATTTGC
TTAGGTCATC AGCTGATTGG TCTTGCCAGC GGTGCAAACA CCATAAAAAT GAAAACTGGT
CATCATGGCG CTAACCATCC CGTCCAAGAT TTGGCAACCG GCACCGTCAT GATTACCAGT
CAGAACCATG GTTTTGCAGT CGATGAAGAC ACGCTACCAG AGAATGTTAA GTCTACTCAT
CGCTCATTAT TTGATGGTAC TAACCAAGGT ATCGAGCTGA CCAATAAGCC AGTATTTAGC
TTCCAAGGTC ACCCAGAAGC CAGCCCTGGC CCGCATGATG CCGCGCCATT ATTTGATAAG
TTTGCAGACA TGCTAGCAGC AGCTAAAGCT TAA
|
|---|
| Protein sequence | MNSSTEIQAI LALADGTIFR GISIGSLGHR VGEVVFNTAM TGYQEILTDP SYARQLVTLT
YPHIGNTGTN AEDVESGNGH KVWADGLIIR DATMVTSNFR HSESLSDYLQ NHNTVAIADI
DTRQLTRLLR DKGAQNGCIM TASNGETISS DDEQQAIKLA QEFAGIEGMD LAKECCTPTT
FEWTAGSWDL SDTLLNRDIA GSHDSGTGGF FKHLGTHIEA KYNVVAYDFG SKTNILRMLV
DRGCHVTVVP AQTPIADVLA MNPDGIFLSN GPGDPAACDY AIDAVRHIIE ETNIPTFGIC
LGHQLIGLAS GANTIKMKTG HHGANHPVQD LATGTVMITS QNHGFAVDED TLPENVKSTH
RSLFDGTNQG IELTNKPVFS FQGHPEASPG PHDAAPLFDK FADMLAAAKA
|
|---|
| |