Gene Psyc_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0792 
SymbolmetZ 
ID3514640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp947894 
End bp949168 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content47% 
IMG OID637669479 
Productcystathionine gamma-synthase 
Protein accessionYP_264079 
Protein GI71065352 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01325] O-succinylhomoserine sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.145563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAT CGCAAGTGCA AAATAAAGAC AATATACATA GCTTGGATGC AAACTGGCGC 
GACGATGCGC TCGATTTAGA ACTCAATTAT GGCATGCAGA CCATTGCAGT ACGTGCAGGT
CAGCATCGTA CTGATGAGGG CGAGCACTCA GAAGCTATTT TTACTACCAG CTCTTATGTG
TATCGCTCAG CGGTTGATGC TGCTGGTCAT TTTGATGGCA CGAAAACAGG CAATGTCTAT
TCACGCCATA CCAATCCAAG CGTACGTACC TTTGAGCGCC GTTTGGCAGC GCTTGAGAAC
GGTGAGCGTG CAGTGGCGAC AGCCTCTGGC ATGGGCGCGA TTTTGACCAT GTGTTTGGCT
TACCTAAAAG CAGGCGATCA CTTGCTGGCT GCTAATCAGT TGTTTGGCTC CTCTATTGGT
TTGTTTAATA ACTATATGGC AAAGTTTGGC GTTGAGGTCA GTTACGTTGA TTGCTTCGAC
AATGACGCAT GGGCGAATGC CGTACAGCCC AATACCAAGG TTATTTATTG CGAAAGCCCC
AGTAATCCAT TGGCACAGAT TTGTGATATC GGTTATTTAA GTCAGCTATG TAAAGCCAAT
GACATACTCC TTGTCGTTGA CAACTGTTTT GCCACCCCAG CTTTGCAGCG TCCGCTTGAT
TTGGGTGCAG ATGTGGTGAT TCATTCTGCA ACCAAGTACC TAGACGGTCA AGGTCGAGTA
CTTGGCGGCG CATTGGTCGG TAGTGATAAG CTGATGCAAG AGGCATTTAC GGTCATACGT
TCAGGTGGCA TCAGCATGAG CCCTTTTAAT GCCTGGGTAT TTACCAAGGG ACTGGAGACG
CTTAAACTGC GTATGCAGGC GCATTGTAGT AATGCCAATC AAGTGGCAGA GTTTTTGGTC
AATCATCCCA ATGTCAGCAC CGTGCATTTT TCAGGCTTGA GCGATCATCC GTCTCATGAA
TTAACCAAGC GTCAGCATCA TATGAAAGAT GGCTTTGGGG CGATCATGGG TTTTGAGGTG
AAAGCTAAAG GGACGCACGA TCCAAAATCT GCCGCTTGGC ATGTGATTGA TTCAACCCAA
ATGGTCTCTA TTACCAACAA TTTGGGTGAT GCCAAAACCA CCATTACCCA TCCTGCAACC
ACCACGCATT TCCGTCTGAG CGCCCAAGAG CGGGCAGAAG CAGGTGTAAA AGACGGTCTT
ATTCGTCTGT CAGTTGGTTT AGAAGATGTT GAAGATATCA TCAAAGATTT GGCGCGTGGT
TTAGACAGTT TGTAA
 
Protein sequence
MSQSQVQNKD NIHSLDANWR DDALDLELNY GMQTIAVRAG QHRTDEGEHS EAIFTTSSYV 
YRSAVDAAGH FDGTKTGNVY SRHTNPSVRT FERRLAALEN GERAVATASG MGAILTMCLA
YLKAGDHLLA ANQLFGSSIG LFNNYMAKFG VEVSYVDCFD NDAWANAVQP NTKVIYCESP
SNPLAQICDI GYLSQLCKAN DILLVVDNCF ATPALQRPLD LGADVVIHSA TKYLDGQGRV
LGGALVGSDK LMQEAFTVIR SGGISMSPFN AWVFTKGLET LKLRMQAHCS NANQVAEFLV
NHPNVSTVHF SGLSDHPSHE LTKRQHHMKD GFGAIMGFEV KAKGTHDPKS AAWHVIDSTQ
MVSITNNLGD AKTTITHPAT TTHFRLSAQE RAEAGVKDGL IRLSVGLEDV EDIIKDLARG
LDSL