Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0781 |
Symbol | lolE |
ID | 3514629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 933257 |
End bp | 934492 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669468 |
Product | ABC lipoprotein exporter, inner membrane subunit, LolE |
Protein accession | YP_264068 |
Protein GI | 71065341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000206341 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGTC CTTTAGCGTT ATTTATCGGC TTACGGTACA CCCGAGCAGA ACGTAGTAAT GGTTTTATCT CTTTTATATC GCTGATCTCA ATGATTGGTC TGACGCTTGG CGTGGCGGTA TTGATTACGG TGCTGTCGGT CATGAACGGC TTTGATCGTG AGCTAAAGAC TCGTATTTTG GGTATGGTGC CGCAAGCGAC CGTCACATCA ACCGAGATTA TCGGTGATTG GAAACAACTC GCGGACAAAA TTAAAGAAGA TCCAGAAGTG GTTGCGGTTG CGCCTTTTAT CCAGTTGCAA GGTATGTTGA CGTCAAATGG TCAGGTAGCC GGTATCATGG TGACAGGTGT TGATCCTGAG TATGAGAAAA ACGTTTCAAT CATCAATGAG CATATGGTGG AAGGCAATAT TGATACGCTA AAAAATGGCG AGTTTGGTAT TGTGCTTGGT GAAGGTATGG TGCAATCACT AGGACTGCAA TTGGGCGACA AAGTCACTCT AGTGCTGCCA GAAGCGTCGC CCTCACCTGC TGGCGTGATA CCACGCTTTA AGCGCTTTAC CTTGACCGGT ATATTCTCTA TCAGTCCAGA AGTCGACAGT CTCATGGCAT TTATTCCAAT GGGCGACGCC GCCAAGCTAT TACGTTTACC AGAGGGCGCG CAAGGTATCC GTATGAAGCT TAATGATATC TTTACAGCGC CAATGGCGGC GCAAAAAGCG GCTGCGATAG CGCCTGAGCA ATTATATCCT AGTGATTGGA CCCAAACGCA TGGCAACTTA TTTGGTGCCA TCCAAATGGA AAAAGCCATG GTAGGATTGC TGCTGTTCTT AATCATACTC GTGGCAGCTT TTAATATTGT CTCAAGTTTG GTCATGTTGG TGACTGATAA AAAAGCGGAT ATTGCTATTT TAAAAACCTT TGGTGCCTCA CCGCGTCTGA TTACTCAAGT CTTCATGGTG CAAGGTGTGG TCATCGGTTT TATTGGTACG ATTGCAGGGA CGATATTGGG CGTGATATTT GCATTGACGG TCAGTGATAT TTTAGGCTTT ATCAATCAAA GCTTTGATCT AAATTTATTT GATGCCTATT TTGTGAACTA TTTGCCATCG CAGCTACGTT TGGTAGATGT GGTACTGATT ACCAGTGCGT CATTTGTGTT GAGCTTTTTG GCAACCGTTT ATCCAGCACG CCGAGCGGCT AAAATTCAGC CTGCACAAAC GCTGCGTTAC GAGTAA
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Protein sequence | MFRPLALFIG LRYTRAERSN GFISFISLIS MIGLTLGVAV LITVLSVMNG FDRELKTRIL GMVPQATVTS TEIIGDWKQL ADKIKEDPEV VAVAPFIQLQ GMLTSNGQVA GIMVTGVDPE YEKNVSIINE HMVEGNIDTL KNGEFGIVLG EGMVQSLGLQ LGDKVTLVLP EASPSPAGVI PRFKRFTLTG IFSISPEVDS LMAFIPMGDA AKLLRLPEGA QGIRMKLNDI FTAPMAAQKA AAIAPEQLYP SDWTQTHGNL FGAIQMEKAM VGLLLFLIIL VAAFNIVSSL VMLVTDKKAD IAILKTFGAS PRLITQVFMV QGVVIGFIGT IAGTILGVIF ALTVSDILGF INQSFDLNLF DAYFVNYLPS QLRLVDVVLI TSASFVLSFL ATVYPARRAA KIQPAQTLRY E
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