Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0767 |
Symbol | |
ID | 3514267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 917799 |
End bp | 919004 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669454 |
Product | small-conductance mechanosensitive ion channel |
Protein accession | YP_264054 |
Protein GI | 71065327 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.967765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.366005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGA TAATGGCAAT CACTAGTATT ACTGAGTTTT TTCAAGAGAT TGCTCGCGAT CTGCATACCA GCCTTTATCT TGCCATTGGT GGCTCTATCG AGGAAGGCAC CTTAGATTGG TCGTCTAAAT CAGTAGAACT GGTGAGCACT GGCATCAAAA TCCTAATATT GCTTGCGATA TCGGGGTTTC TTTATTGGCT TGCTATCTAT GTACTCAAAA AAAGCAAAGC ACGCATTCGC CTTAATGAGC GCTGGGCTAA AATTGCCCGC TCAATCCTGC GTTATGTATG GGCCGTGACC AGTGTCATTG CTATTATGAG TCAGCTGAAT TTTGAGCCAG ATACCATCAA GGCCACTGCC AAAGCCAGTA CATGGGCGGG GATATATTAT GTATTATGGA CATCTTCTGG ACAAATTATC CATAAAATCC TACAGCACTA TGGTCTAAAC GCCTCTATTG AGCAGCTGCT TAAAAATATC TTATCGGTGC TGCTATTAGT CTTAGGGCTT GCCAGTGTCA TGGCACAGTT TGGCTTTGAT ATTGTCTCTT TAGTAGCAGG TTTGGGTATC GCCGGTTTGG CAGTCGGTTT TGCCGCGCAG TCAACGCTTG CCAATTTTAT TGCGGGCATT ACTATTTTGC TTGAGCAGTC CTTTCAAGTC GGTGACTGGG TCAACATCAA TGACAATGAA GGTCGCGTAG TGGTGATTGC CTTACGTACG ACCCATATCT TAACTCGTGA CAATATTACA GTCATCATAC CCAATTCGAA TGTCGCCTCC TCCGTCGTTA CCAACCTGAC CTCCAAAAAC TTTATACGCT TTGATATTCA GATGCGTATT GCTTTTGAAG ATGATATCGA TAAAGCACGT GAGGAAATTC TGCAGGTACT GTCTGATAGT GAGGCGGTAC TTAACCGACC TGAGTCTTCT GCGACCGTGG CAGAGATTGG CGAGTATGGC GTATATTTTA TTGTACGCTT TTGGGTCAAA CCAGCGGCAG TAGCTCGTAT GCCCAAAATC AAAGAGGATT TACGAGAGAA TATCAAACGC GCTTTTGATG CCGCTGATAT CTCGACCCCT TATCCTCATA TGCGCCTCTT AATGCCAAGA GAAGACGTCT ATCCGATTGT GACCAAGCCC AAGCCATTGG CAACGACCGC GCAAACTGTT TCAGAGTCAT TAGCGCTGAA CAAAGACCAG CATTAA
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Protein sequence | MDKIMAITSI TEFFQEIARD LHTSLYLAIG GSIEEGTLDW SSKSVELVST GIKILILLAI SGFLYWLAIY VLKKSKARIR LNERWAKIAR SILRYVWAVT SVIAIMSQLN FEPDTIKATA KASTWAGIYY VLWTSSGQII HKILQHYGLN ASIEQLLKNI LSVLLLVLGL ASVMAQFGFD IVSLVAGLGI AGLAVGFAAQ STLANFIAGI TILLEQSFQV GDWVNINDNE GRVVVIALRT THILTRDNIT VIIPNSNVAS SVVTNLTSKN FIRFDIQMRI AFEDDIDKAR EEILQVLSDS EAVLNRPESS ATVAEIGEYG VYFIVRFWVK PAAVARMPKI KEDLRENIKR AFDAADISTP YPHMRLLMPR EDVYPIVTKP KPLATTAQTV SESLALNKDQ H
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