Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0704 |
Symbol | |
ID | 3516164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 837666 |
End bp | 838757 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669394 |
Product | murein-DD-endopeptidase |
Protein accession | YP_263997 |
Protein GI | 71065270 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000186764 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.739418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAC TACCATTAAC CAAACAGCAA TTAATCGCTG CTATGATTTC ATTGAGTTTG GGCAGTGTCG CACAAGCCGC ACTTACAATT AATGGTAGCG CTAGCTCTGA GTCTAGTGCT CGCCTTAGCT GGGGCGGTGC CGACAGCTTA TCTGAAGCAC GCAGTATCAT GTCTAAGTCT GGCAGCAGTT CTACAATTAA AAAAGTAGAT AACGGTTCGA GCACAACCAA TATCACTAAT ACGACCAGTT TTGGTAGTAA TAACAACAGT TATAATAATG CCAATAGCTA TAACACCACT TATCGTGGCA GTTTTGGCAA TAGCAATATG ATTCCGATCA GCACCGATTC GCGCAGTGTC GCGGTTATCG ATGCGGAGAC TGGCGAATCT ATCTATGAAA AAGATGCCGA TATCGCGCGT CCAATGGCAA GCATTACCAA AGTGATGACC GCTATGGTGG TACTTGATGC TGGTTTGGAC ATGCGTGAGG AGCTCACGCT TGATCCAGAA GATTTCGTTG GCCCAAAGCG TGCTAGTTCA AACTTAAAAT CAGGCGACCG TCTTAATCGT GCTGAGATGC TATTAATGGC ATTAATGAAA TCAGAGAACC CTGCAGCAAA AAGTCTTGCC CGTAATTATC CAGGTGGCTA CAGCGCCTTT ATGCGCGCTA TGAACCGTAA AGCTCAAGAG CTTGGCATGA GTACCGCTTT CTTTGGTGAC CCAACTGGTC TTGATAAGCG TAACATTGCT TCATCAAATG ACTTGGTTAA AATGGTTCGT GCTGCTGGTA ATTATGATGT GATACGTCGT TTTTCGACCA CCAAGAGCTA TGACTTTTTT GTCTCTAACT ACGCAAGTGG CAACCGCACT TATAAAGCCA ATAACACGAG CAGCTTAGTT CGTGATGGCA GCTATCCTAT TGGTATCTCA AAGACAGGCT TTATCAATGA AGCAGGTCGT TGTGTTGTCA TGGAGACGCG CGTCAATAAT CGTCCCGCTA TTATCGTGAT TTTGGGTGCC AATAGCTCAG CAACGCGTTG GGGTGATGCC AAAAATATCT TAAACAGCTT GGCAACGCGC CGTACGGTAT AA
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Protein sequence | MKQLPLTKQQ LIAAMISLSL GSVAQAALTI NGSASSESSA RLSWGGADSL SEARSIMSKS GSSSTIKKVD NGSSTTNITN TTSFGSNNNS YNNANSYNTT YRGSFGNSNM IPISTDSRSV AVIDAETGES IYEKDADIAR PMASITKVMT AMVVLDAGLD MREELTLDPE DFVGPKRASS NLKSGDRLNR AEMLLMALMK SENPAAKSLA RNYPGGYSAF MRAMNRKAQE LGMSTAFFGD PTGLDKRNIA SSNDLVKMVR AAGNYDVIRR FSTTKSYDFF VSNYASGNRT YKANNTSSLV RDGSYPIGIS KTGFINEAGR CVVMETRVNN RPAIIVILGA NSSATRWGDA KNILNSLATR RTV
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